Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053656
Identifier: 89053656
GI number: 89053656
Start: 1130993
End: 1131748
Strand: Direct
Name: 89053656
Synonym: Jann_1165
Alternate gene names: NA
Gene position: 1130993-1131748 (Clockwise)
Preceding gene: 89053655
Following gene: 89053657
Centisome position: 26.19
GC content: 57.67
Gene sequence:
>756_bases ATGAGCAATGCCGCAAATCAGGCTTCGCAAAAATCTGTTGGCAATTTTGCAAGCGCTCTCATTCGGGCTCACATGTCCAA CACCCGGTTCTTTCCTGATGGCCCGGTTCCGACTTGTTCAAAAGATGCCTTCGCAGTTCAGGCAGCCGTTATGGCGGAAT TGGGGGACATCGGCGCGTTCAAGGTGGCTGACAAATCCGGTGCGCCCTTCGTCATGGCCCCGATCCGCGCCGATCGTATT TTTCAGAATGGTGCCGATGTTCCCATTGTTGACAAGGCGGGGATCGAGCTTGAGGTCGGTTTCGAAATTCTGTCGCCCAT TCCCCCAGACGCCGACATCTCGACCATTGCAGGCTGTGTGTGGCCACGCCCCGTGATCGAGGTGGTCGATACACGCATCG CCGGGCCGCTGGCCGATGACCCCTTCGTCAAGCTGGCCGATCTGCAGGCCAACTCAGCCCTAGTGGTCGGTGCACGTGCA AGGCAGTGGGATGGTGCGGACTTTGGTGAGGTTGAGGCGCAACTCACCTGCGGTGACACGGTCGTGTTGGATGGCATGGC CGTCGTGCCTGGCGGGTCTGCGTTGAACATGGTCGCCAAATTGGCCGAACGCATAGGTGAACACTGTGGCGGTCTTCAAC CAGGGCAAATCGTGATCACTGGGTCGCTGAATGGCCTGCCGTATTTCCCTGCCCGGCAGGATGTGCGGGGCAATATTGAA AAATTGGCGGAGGTTGCATTTCACTTGTCACGATAA
Upstream 100 bases:
>100_bases CTATTGTCAAAGCGATTGAAGCGCGCGATGGCACCCGCCTCAGTTCGCTGCTCCGGACGCACCTAAACAACAAACTAGCC GCGTTGAGAAAGGCGTTGTC
Downstream 100 bases:
>100_bases GTGACTTTGCGCCGTGACACTAAGGAAGCACATTACAATGCTGATCTAGTCTGGTCGCGAAAGCTGCCATAAGAACATGC TTCAGTATCGGTCACTTTGG
Product: putative hydratase protein
Products: NA
Alternate protein names: 2-Keto-4-Pentenoate Hydratase-Like Protein; Hydratase Protein; 2-Keto-4-Pentenoate Hydratase; Hydratase/Decarboxylase Family Protein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSNAANQASQKSVGNFASALIRAHMSNTRFFPDGPVPTCSKDAFAVQAAVMAELGDIGAFKVADKSGAPFVMAPIRADRI FQNGADVPIVDKAGIELEVGFEILSPIPPDADISTIAGCVWPRPVIEVVDTRIAGPLADDPFVKLADLQANSALVVGARA RQWDGADFGEVEAQLTCGDTVVLDGMAVVPGGSALNMVAKLAERIGEHCGGLQPGQIVITGSLNGLPYFPARQDVRGNIE KLAEVAFHLSR
Sequences:
>Translated_251_residues MSNAANQASQKSVGNFASALIRAHMSNTRFFPDGPVPTCSKDAFAVQAAVMAELGDIGAFKVADKSGAPFVMAPIRADRI FQNGADVPIVDKAGIELEVGFEILSPIPPDADISTIAGCVWPRPVIEVVDTRIAGPLADDPFVKLADLQANSALVVGARA RQWDGADFGEVEAQLTCGDTVVLDGMAVVPGGSALNMVAKLAERIGEHCGGLQPGQIVITGSLNGLPYFPARQDVRGNIE KLAEVAFHLSR >Mature_250_residues SNAANQASQKSVGNFASALIRAHMSNTRFFPDGPVPTCSKDAFAVQAAVMAELGDIGAFKVADKSGAPFVMAPIRADRIF QNGADVPIVDKAGIELEVGFEILSPIPPDADISTIAGCVWPRPVIEVVDTRIAGPLADDPFVKLADLQANSALVVGARAR QWDGADFGEVEAQLTCGDTVVLDGMAVVPGGSALNMVAKLAERIGEHCGGLQPGQIVITGSLNGLPYFPARQDVRGNIEK LAEVAFHLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26262; Mature: 26131
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAANQASQKSVGNFASALIRAHMSNTRFFPDGPVPTCSKDAFAVQAAVMAELGDIGAF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE KVADKSGAPFVMAPIRADRIFQNGADVPIVDKAGIELEVGFEILSPIPPDADISTIAGCV EEECCCCCCEEEECCCHHHHHHCCCCCCEECCCCCEEEECHHHHCCCCCCCCHHHHHHHC WPRPVIEVVDTRIAGPLADDPFVKLADLQANSALVVGARARQWDGADFGEVEAQLTCGDT CCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCE VVLDGMAVVPGGSALNMVAKLAERIGEHCGGLQPGQIVITGSLNGLPYFPARQDVRGNIE EEECCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCHH KLAEVAFHLSR HHHHHHHHHCC >Mature Secondary Structure SNAANQASQKSVGNFASALIRAHMSNTRFFPDGPVPTCSKDAFAVQAAVMAELGDIGAF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE KVADKSGAPFVMAPIRADRIFQNGADVPIVDKAGIELEVGFEILSPIPPDADISTIAGCV EEECCCCCCEEEECCCHHHHHHCCCCCCEECCCCCEEEECHHHHCCCCCCCCHHHHHHHC WPRPVIEVVDTRIAGPLADDPFVKLADLQANSALVVGARARQWDGADFGEVEAQLTCGDT CCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCE VVLDGMAVVPGGSALNMVAKLAERIGEHCGGLQPGQIVITGSLNGLPYFPARQDVRGNIE EEECCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCHH KLAEVAFHLSR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA