Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053632
Identifier: 89053632
GI number: 89053632
Start: 1102176
End: 1103192
Strand: Direct
Name: 89053632
Synonym: Jann_1141
Alternate gene names: NA
Gene position: 1102176-1103192 (Clockwise)
Preceding gene: 89053630
Following gene: 89053633
Centisome position: 25.53
GC content: 67.65
Gene sequence:
>1017_bases ATGACATCGGAATTGTACCGCGTTCTTGAACTACAAAAACCGGTGATATCGGCCCCGATGGGCGGGGCTGCGGGGCCCGA CCTTGTGGCGGCGGTCTGCAATGCGGGCGGCTACGGTGTGATCCCGCTTTGGGGCAAGCCGGTTCCGCAACTCATGGCCG GAATTGACGCGGTCCGTGCGCTGACGGATCGCAACTTCGCGGTGAACCTGAACCTGTCGTTTGATTTTGAGGATCAGTTG AGCGCCTGCATCGCGGCGGAGGTTCATGCCGTTTCGCTGTTTTGGGGGCAGGCCCCGTCGGCGATTACGCGGGCGAAGGA GGGCGGCTTGGTCGTTTTCGTCAGCGTCGGATCGGTCGCCGAGGCCGTGGCGGCTGAGGCGGCGGGCGCGGATATCATCG TCGCCCAGGGGTGGGAGGCAGGCGGTCACGTCTGGGGGCAGGTCAGCACACTTGCCCTGGTCCCGGCGGTGGCCGATGCC GTGACGGTGCCCGTCGTGGCGGCCGGCGGGATCGCCGATGGCCGCGGCATGGCGGCGGCGCTGATGCTGGGGGCTGCGGG CGTCTGGATCGGAACGCGGTTTCTTGCAAGCCGCGAGGCGACGATCCATGCGGCGTACCTTGCGCGTGTTCTGGCGGCCT CGGAGGTCGACACGGAGTGGTATTCCGACCTCTACGATGTCGCATGGCCCGACGCGCCGCATCGGGCGCTGCGCAATTCG ACAGCGCGCGCGTGGCGGGGGGCCGGTGCCCCTGCGCCGGGGGACCGCCCCAATGAGCGTGAGGTGATCGGACACCGCCC GGAGGGCGATCCGGTGGTGCGATACCAAAGCTATACGCCGCTTCCCGACACCACCGGCGATGTGGAGGCCATGTCATTGT GGGCCGGTCAGGGGGTTGGCCTTGTCCGGGAGGTGCAGGGCGCGGCAGAGATATTGTCCGAGATATACGAACAGGCGCTG GACTGTCTGCGCAAGGCGCCGGGCGCGATGGGTGCGGACCAGGGCGCGCAGAGATAG
Upstream 100 bases:
>100_bases AACGGGCGTGGGTCAGCGCGCGCCGCCACCACATCACTGTTGACGTGTCGGTCGGCGTCCCGCCACCTCAACACGGCAGA CCCGAGGAAAGGAAGCTGAG
Downstream 100 bases:
>100_bases GATTGGCTTTGACTCGGTGCACCTCTTGGGATTAAATGAACAAGTGTTCAATTAAAGGGAGTGGCGCAGATGTTCCTTGG GGCGATGAATTTCGATTTGG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTSELYRVLELQKPVISAPMGGAAGPDLVAAVCNAGGYGVIPLWGKPVPQLMAGIDAVRALTDRNFAVNLNLSFDFEDQL SACIAAEVHAVSLFWGQAPSAITRAKEGGLVVFVSVGSVAEAVAAEAAGADIIVAQGWEAGGHVWGQVSTLALVPAVADA VTVPVVAAGGIADGRGMAAALMLGAAGVWIGTRFLASREATIHAAYLARVLAASEVDTEWYSDLYDVAWPDAPHRALRNS TARAWRGAGAPAPGDRPNEREVIGHRPEGDPVVRYQSYTPLPDTTGDVEAMSLWAGQGVGLVREVQGAAEILSEIYEQAL DCLRKAPGAMGADQGAQR
Sequences:
>Translated_338_residues MTSELYRVLELQKPVISAPMGGAAGPDLVAAVCNAGGYGVIPLWGKPVPQLMAGIDAVRALTDRNFAVNLNLSFDFEDQL SACIAAEVHAVSLFWGQAPSAITRAKEGGLVVFVSVGSVAEAVAAEAAGADIIVAQGWEAGGHVWGQVSTLALVPAVADA VTVPVVAAGGIADGRGMAAALMLGAAGVWIGTRFLASREATIHAAYLARVLAASEVDTEWYSDLYDVAWPDAPHRALRNS TARAWRGAGAPAPGDRPNEREVIGHRPEGDPVVRYQSYTPLPDTTGDVEAMSLWAGQGVGLVREVQGAAEILSEIYEQAL DCLRKAPGAMGADQGAQR >Mature_337_residues TSELYRVLELQKPVISAPMGGAAGPDLVAAVCNAGGYGVIPLWGKPVPQLMAGIDAVRALTDRNFAVNLNLSFDFEDQLS ACIAAEVHAVSLFWGQAPSAITRAKEGGLVVFVSVGSVAEAVAAEAAGADIIVAQGWEAGGHVWGQVSTLALVPAVADAV TVPVVAAGGIADGRGMAAALMLGAAGVWIGTRFLASREATIHAAYLARVLAASEVDTEWYSDLYDVAWPDAPHRALRNST ARAWRGAGAPAPGDRPNEREVIGHRPEGDPVVRYQSYTPLPDTTGDVEAMSLWAGQGVGLVREVQGAAEILSEIYEQALD CLRKAPGAMGADQGAQR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35088; Mature: 34957
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELYRVLELQKPVISAPMGGAAGPDLVAAVCNAGGYGVIPLWGKPVPQLMAGIDAVRA CCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH LTDRNFAVNLNLSFDFEDQLSACIAAEVHAVSLFWGQAPSAITRAKEGGLVVFVSVGSVA HHCCCEEEEEEEEECHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEEECCHHH EAVAAEAAGADIIVAQGWEAGGHVWGQVSTLALVPAVADAVTVPVVAAGGIADGRGMAAA HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH LMLGAAGVWIGTRFLASREATIHAAYLARVLAASEVDTEWYSDLYDVAWPDAPHRALRNS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCC TARAWRGAGAPAPGDRPNEREVIGHRPEGDPVVRYQSYTPLPDTTGDVEAMSLWAGQGVG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCH LVREVQGAAEILSEIYEQALDCLRKAPGAMGADQGAQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TSELYRVLELQKPVISAPMGGAAGPDLVAAVCNAGGYGVIPLWGKPVPQLMAGIDAVRA CHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH LTDRNFAVNLNLSFDFEDQLSACIAAEVHAVSLFWGQAPSAITRAKEGGLVVFVSVGSVA HHCCCEEEEEEEEECHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEEECCHHH EAVAAEAAGADIIVAQGWEAGGHVWGQVSTLALVPAVADAVTVPVVAAGGIADGRGMAAA HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH LMLGAAGVWIGTRFLASREATIHAAYLARVLAASEVDTEWYSDLYDVAWPDAPHRALRNS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCC TARAWRGAGAPAPGDRPNEREVIGHRPEGDPVVRYQSYTPLPDTTGDVEAMSLWAGQGVG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCH LVREVQGAAEILSEIYEQALDCLRKAPGAMGADQGAQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA