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The map label for this gene is 89053610

Identifier: 89053610

GI number: 89053610

Start: 1079250

End: 1079789

Strand: Direct

Name: 89053610

Synonym: Jann_1119

Alternate gene names: NA

Gene position: 1079250-1079789 (Clockwise)

Preceding gene: 89053609

Following gene: 89053624

Centisome position: 24.99

GC content: 60.37

Gene sequence:

>540_bases
ATGACCGATACCCCAAAGCCGCTTCTCATCAAGCGATATGCCAGCCGCCGTCTGTATAATACGGAGACCTCCGATTATGT
GACGCTGGAGGATATTGCAGGCTTCATCCGCGACGGGCGCGAGGTGCAGATCGTGGACCTCAAATCCGGCGATGACCTGA
CGCGCCAGTACCTGTTGCAGATCGTGGCCGATCACGAATCGCGCGGGGAGAGTGTGCTGCCCATCGCCGTGCTGACCGAT
CTGGTGCGCAGCTACACAACGCAGGCGCAATCGGTCGTACCGGAGTTTCTGGCGTCGAGTTTTGAGATGCTGCAACAGGG
CCAGTCCAAGATGATGGACAATATGGCCGCGATCCACCCCATGGCCTCCATGCCCGGGTTTGACGCCATGCGCGCGCAGC
AAGAGGCGTTTTTTGCCGCCATGACCGCCAGCGTGCCCAAACCCCCCGAGGCCGCGCCCGAGGATGCTGAGCCCGCCGAT
GATCTGGACGCGATCAAGCGCCAGCTGGCGGATTTACAGAACAAACTCAGCAAGATGTGA

Upstream 100 bases:

>100_bases
TCAAAACGCCCGTTTGCTTTTCTGCACAAGCAGCGTAGGCTTTCGAATGCTGCACCGCAAAAGCCCCGGGATCCGCGGGC
ACCAGAGGAGGGCCAGCGCG

Downstream 100 bases:

>100_bases
CGGTCGGGTCCATGGGCCGCTGTTGCGTCTGGGGTGGCGGTCGGATTTTGAGTTGTATCTGCCCGGATGAAAGAGGGAGC
GGCGTGAGCCTCGTCAGACG

Product: polyhydroxyalkanoate synthesis repressor PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTDTPKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIVDLKSGDDLTRQYLLQIVADHESRGESVLPIAVLTD
LVRSYTTQAQSVVPEFLASSFEMLQQGQSKMMDNMAAIHPMASMPGFDAMRAQQEAFFAAMTASVPKPPEAAPEDAEPAD
DLDAIKRQLADLQNKLSKM

Sequences:

>Translated_179_residues
MTDTPKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIVDLKSGDDLTRQYLLQIVADHESRGESVLPIAVLTD
LVRSYTTQAQSVVPEFLASSFEMLQQGQSKMMDNMAAIHPMASMPGFDAMRAQQEAFFAAMTASVPKPPEAAPEDAEPAD
DLDAIKRQLADLQNKLSKM
>Mature_178_residues
TDTPKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIVDLKSGDDLTRQYLLQIVADHESRGESVLPIAVLTDL
VRSYTTQAQSVVPEFLASSFEMLQQGQSKMMDNMAAIHPMASMPGFDAMRAQQEAFFAAMTASVPKPPEAAPEDAEPADD
LDAIKRQLADLQNKLSKM

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 19899; Mature: 19768

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIVDLKSGDDLTRQYLLQ
CCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
IVADHESRGESVLPIAVLTDLVRSYTTQAQSVVPEFLASSFEMLQQGQSKMMDNMAAIHP
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASMPGFDAMRAQQEAFFAAMTASVPKPPEAAPEDAEPADDLDAIKRQLADLQNKLSKM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDTPKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIVDLKSGDDLTRQYLLQ
CCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
IVADHESRGESVLPIAVLTDLVRSYTTQAQSVVPEFLASSFEMLQQGQSKMMDNMAAIHP
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASMPGFDAMRAQQEAFFAAMTASVPKPPEAAPEDAEPADDLDAIKRQLADLQNKLSKM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]