Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053609
Identifier: 89053609
GI number: 89053609
Start: 1078507
End: 1078962
Strand: Direct
Name: 89053609
Synonym: Jann_1118
Alternate gene names: NA
Gene position: 1078507-1078962 (Clockwise)
Preceding gene: 89053608
Following gene: 89053610
Centisome position: 24.98
GC content: 55.48
Gene sequence:
>456_bases ATGGCCAAAGCCGCACAAACCCCCGACTTCTCGAAGTACATGACCGAGATGATGTCCTCTTTCCCGATGGACATGTCCGC CATGACCGACGCCTTCAAATCCCAGGCCGCCGTGTCTGAGAAAATGTCCAAGGTCGTTCTGGAAGCCGCAGAGAAATCCA CCGAGATTTCTTCCAAGTGGACCAAAGACACCATCGCCAAGATCGGCGACGTCTCCGCTGCCAAGGAAGAACCTGCCGAC TACACCAAATCCATGACCGACTTCGCCTCCGCGCAAGCCGAAATGGCGACTGAGAACATGGCCCTTTTCGCTGAGATCGC GAAAAAAGTGCAGATGGAAACGGTTGAGCTGATGATGGCTGCCGGTAAAGAAGCATCTGAAGAAGCAACCGCTGCCGTCA AGAAGGCAACCGCCGACGTGACGACGGCTGCCAAGAAAGCCGCAACCGCCAAGTAA
Upstream 100 bases:
>100_bases TGCTGCAGTGCAGAATAAACCTTGACTTTCTGCGCTGCAGCATTCATATATGCTTCATCAATTCATTGCCCCACACGGGT AGAACACCGGAGACTGAACA
Downstream 100 bases:
>100_bases TTGGCCCCTGCGAAAACAGCCTGCGCGCCGTCCTCCGCGGTGCGCAGGTTCAGCGACCGCGACGCGGGGCCCTCCCCCTT GCTTGACGCGGACCTTGGAA
Product: phasin, PhaP
Products: NA
Alternate protein names: Granule-Associated Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAKAAQTPDFSKYMTEMMSSFPMDMSAMTDAFKSQAAVSEKMSKVVLEAAEKSTEISSKWTKDTIAKIGDVSAAKEEPAD YTKSMTDFASAQAEMATENMALFAEIAKKVQMETVELMMAAGKEASEEATAAVKKATADVTTAAKKAATAK
Sequences:
>Translated_151_residues MAKAAQTPDFSKYMTEMMSSFPMDMSAMTDAFKSQAAVSEKMSKVVLEAAEKSTEISSKWTKDTIAKIGDVSAAKEEPAD YTKSMTDFASAQAEMATENMALFAEIAKKVQMETVELMMAAGKEASEEATAAVKKATADVTTAAKKAATAK >Mature_150_residues AKAAQTPDFSKYMTEMMSSFPMDMSAMTDAFKSQAAVSEKMSKVVLEAAEKSTEISSKWTKDTIAKIGDVSAAKEEPADY TKSMTDFASAQAEMATENMALFAEIAKKVQMETVELMMAAGKEASEEATAAVKKATADVTTAAKKAATAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16094; Mature: 15963
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.7 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAAQTPDFSKYMTEMMSSFPMDMSAMTDAFKSQAAVSEKMSKVVLEAAEKSTEISSKW CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKDTIAKIGDVSAAKEEPADYTKSMTDFASAQAEMATENMALFAEIAKKVQMETVELMMA HHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKEASEEATAAVKKATADVTTAAKKAATAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKAAQTPDFSKYMTEMMSSFPMDMSAMTDAFKSQAAVSEKMSKVVLEAAEKSTEISSKW CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKDTIAKIGDVSAAKEEPADYTKSMTDFASAQAEMATENMALFAEIAKKVQMETVELMMA HHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKEASEEATAAVKKATADVTTAAKKAATAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA