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The map label for this gene is phaC [H]

Identifier: 89053608

GI number: 89053608

Start: 1076535

End: 1078373

Strand: Direct

Name: phaC [H]

Synonym: Jann_1117

Alternate gene names: 89053608

Gene position: 1076535-1078373 (Clockwise)

Preceding gene: 89053605

Following gene: 89053609

Centisome position: 24.93

GC content: 60.14

Gene sequence:

>1839_bases
GTGTCAGACAAAAACGAAGATGACGTTAAGGCGGAAACCACGGCTCCTGACGGGCCCGAAGCGCTGGAGCGGTTGAACGC
CAATCTTGCGAAGGTGGAAGGCCTGTCGAAGCGGCTTGTGGCCGCGATGGGGCATCGCGCGCCGTCCGATCAGGGGCTGT
CGGGGCCGGGGCAGGAACTCTACGTGAAAGCAGGCGCGGCCTATTGGGCGGACGCCATGGCTAACCCCACGAAATTGCTG
GAACAACAGGCACAGTTCTGGGGTCAGGCCATGTCCACCTATATGGAGATGCAGGAGGCCATCGCATCGGGCCAATTGCC
GCTTCTGGACGATGATGACCTGCCCGCCGACATGGCCCGCGACAAGCGCTTTTCCAACCCGCTCTGGCGCACGCATCCCT
ACTTCAATTTCGTGCGTCACCAATATGTGATGGGGTCCGAGGCGATCCGCAAAGCGGTCTCTGACCTCGACGGGCTGGAG
CCGCAGGACAAGCAGCGGGTGGAGTTCTTCGCCACCCAGGTGATTGAGCTGTTCTCGCCCACCAACTACTTCGGCACCAA
CCCCGACGCGCTGGAAAAAGCGGTGGAGACCGATGGCGAAAGCCTTGTGCACGGGCTGGAAAACCTTGTGCGGGATATCG
AGGCCCATGGCGGGGAGTTGCTGCCCACGCTCGCCGATCCGGACGCGTTTGAAGTTGGCACCAACATCGGCACCACCGAA
GGCAGCGTCGTCTACCGCAACCGGATGATGGAGTTGATCCAATACGCGCCCACGACCGAGTTGGTCCACAAGACGCCTTT
GGTGATCTTTCCGCCCTGGATCAACAAGTTCTACATCCTGGACCTCAAACCCCAGAACAGCCTGATCAAATGGCTTGTGG
GCCAAGGCTACACCCTGTTCGTGGTCAGCTGGAAGAACCCCGATGACACCTATGCCGATGTGGGTCTTGGTGACTATGTC
GAAGACGGCTACCTCGCCGCCGTCGAACAGGTGAAGGAGATCACCGGCGAAAAGCAGGTCAACGCCGTGGGCTATTGCAT
CGCCGGTACGACCCTGAACCTGACGCTCGCGCTGATGAAGAAGCGCGGCGACACGTCGATCAAGTCGGCCACCTTCTTCA
CGACGCTCACGGATTTCTCGGTGCAGGGCGAATTCACACCGTTCCTACAAGATGATTTTGTCGATGCGATTGAACGGCAG
GTGGATCAGGACGGCGTGCTCAACAGCTATTTCATGTCCAAGACCATGTCGTTCCTGCGCTCCAAGGATCTGATCTACGG
GCCCGCCGTGCGCTCCTACATGATGGGGGAGGCGCCGCCCGCCTTTGACCTGCTCTACTGGAATGGCGATAGCACCAACC
TGCCCGGCAAGATGGCGATGGAATACCTGCGCGGCCTGTGTCAGGGCGATCAACTCGCCTCGTCGGGGTTTGACCTGTTT
GGCGAGTCGCTCTCCCTGAAAGACGTGACCGTGCCCCTCTGCGCCATTGCCTGCAAAACGGATCACATCGCGCCCTGGGT
CGATTGTTATCGCGGCGTGACCAAGATGGGATCGCGCAGCAAGACGTTCATCCTGTCGGAATCCGGCCACATCGCGGGCA
TCGTGAACCCGCCATCGAAGAAGAAATACGGCCATTTCACCAATGACGCCGTGAAGGGGGAGGCCGCAGACTGGTTTGAG
GGCGCGACCCACAACGATGGCTCGTGGTGGCCGCTCTGGGGGACGTGGCTGTCCAAGCGGTCCGGCAAGCAAATTGCTGC
ACGTGCACCGGGTGAGGATGGCCGAGAAATTTTGGGTCCGGCCCCCGGAACCTACGTCAAGGAAGGCAAAACTAACTGA

Upstream 100 bases:

>100_bases
GGGACACACCGGATCATTTCGTCGCGTGGACCGCCTCACCCAGGTCCCCGTAATGTATATCGCCATTATGCAGATGCAGC
ATTAAGCCGGGGAAAGCAAG

Downstream 100 bases:

>100_bases
TATTGCTGATGTTTCCGGCTTGATGGTGGCTTATGCTGCAGTGCAGAATAAACCTTGACTTTCTGCGCTGCAGCATTCAT
ATATGCTTCATCAATTCATT

Product: Poly(R)-hydroxyalkanoic acid synthase, class I

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MSDKNEDDVKAETTAPDGPEALERLNANLAKVEGLSKRLVAAMGHRAPSDQGLSGPGQELYVKAGAAYWADAMANPTKLL
EQQAQFWGQAMSTYMEMQEAIASGQLPLLDDDDLPADMARDKRFSNPLWRTHPYFNFVRHQYVMGSEAIRKAVSDLDGLE
PQDKQRVEFFATQVIELFSPTNYFGTNPDALEKAVETDGESLVHGLENLVRDIEAHGGELLPTLADPDAFEVGTNIGTTE
GSVVYRNRMMELIQYAPTTELVHKTPLVIFPPWINKFYILDLKPQNSLIKWLVGQGYTLFVVSWKNPDDTYADVGLGDYV
EDGYLAAVEQVKEITGEKQVNAVGYCIAGTTLNLTLALMKKRGDTSIKSATFFTTLTDFSVQGEFTPFLQDDFVDAIERQ
VDQDGVLNSYFMSKTMSFLRSKDLIYGPAVRSYMMGEAPPAFDLLYWNGDSTNLPGKMAMEYLRGLCQGDQLASSGFDLF
GESLSLKDVTVPLCAIACKTDHIAPWVDCYRGVTKMGSRSKTFILSESGHIAGIVNPPSKKKYGHFTNDAVKGEAADWFE
GATHNDGSWWPLWGTWLSKRSGKQIAARAPGEDGREILGPAPGTYVKEGKTN

Sequences:

>Translated_612_residues
MSDKNEDDVKAETTAPDGPEALERLNANLAKVEGLSKRLVAAMGHRAPSDQGLSGPGQELYVKAGAAYWADAMANPTKLL
EQQAQFWGQAMSTYMEMQEAIASGQLPLLDDDDLPADMARDKRFSNPLWRTHPYFNFVRHQYVMGSEAIRKAVSDLDGLE
PQDKQRVEFFATQVIELFSPTNYFGTNPDALEKAVETDGESLVHGLENLVRDIEAHGGELLPTLADPDAFEVGTNIGTTE
GSVVYRNRMMELIQYAPTTELVHKTPLVIFPPWINKFYILDLKPQNSLIKWLVGQGYTLFVVSWKNPDDTYADVGLGDYV
EDGYLAAVEQVKEITGEKQVNAVGYCIAGTTLNLTLALMKKRGDTSIKSATFFTTLTDFSVQGEFTPFLQDDFVDAIERQ
VDQDGVLNSYFMSKTMSFLRSKDLIYGPAVRSYMMGEAPPAFDLLYWNGDSTNLPGKMAMEYLRGLCQGDQLASSGFDLF
GESLSLKDVTVPLCAIACKTDHIAPWVDCYRGVTKMGSRSKTFILSESGHIAGIVNPPSKKKYGHFTNDAVKGEAADWFE
GATHNDGSWWPLWGTWLSKRSGKQIAARAPGEDGREILGPAPGTYVKEGKTN
>Mature_611_residues
SDKNEDDVKAETTAPDGPEALERLNANLAKVEGLSKRLVAAMGHRAPSDQGLSGPGQELYVKAGAAYWADAMANPTKLLE
QQAQFWGQAMSTYMEMQEAIASGQLPLLDDDDLPADMARDKRFSNPLWRTHPYFNFVRHQYVMGSEAIRKAVSDLDGLEP
QDKQRVEFFATQVIELFSPTNYFGTNPDALEKAVETDGESLVHGLENLVRDIEAHGGELLPTLADPDAFEVGTNIGTTEG
SVVYRNRMMELIQYAPTTELVHKTPLVIFPPWINKFYILDLKPQNSLIKWLVGQGYTLFVVSWKNPDDTYADVGLGDYVE
DGYLAAVEQVKEITGEKQVNAVGYCIAGTTLNLTLALMKKRGDTSIKSATFFTTLTDFSVQGEFTPFLQDDFVDAIERQV
DQDGVLNSYFMSKTMSFLRSKDLIYGPAVRSYMMGEAPPAFDLLYWNGDSTNLPGKMAMEYLRGLCQGDQLASSGFDLFG
ESLSLKDVTVPLCAIACKTDHIAPWVDCYRGVTKMGSRSKTFILSESGHIAGIVNPPSKKKYGHFTNDAVKGEAADWFEG
ATHNDGSWWPLWGTWLSKRSGKQIAARAPGEDGREILGPAPGTYVKEGKTN

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 67576; Mature: 67445

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKNEDDVKAETTAPDGPEALERLNANLAKVEGLSKRLVAAMGHRAPSDQGLSGPGQEL
CCCCCCCCCEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YVKAGAAYWADAMANPTKLLEQQAQFWGQAMSTYMEMQEAIASGQLPLLDDDDLPADMAR
EEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
DKRFSNPLWRTHPYFNFVRHQYVMGSEAIRKAVSDLDGLEPQDKQRVEFFATQVIELFSP
HHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TNYFGTNPDALEKAVETDGESLVHGLENLVRDIEAHGGELLPTLADPDAFEVGTNIGTTE
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCC
GSVVYRNRMMELIQYAPTTELVHKTPLVIFPPWINKFYILDLKPQNSLIKWLVGQGYTLF
CCHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEE
VVSWKNPDDTYADVGLGDYVEDGYLAAVEQVKEITGEKQVNAVGYCIAGTTLNLTLALMK
EEEECCCCCCEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
KRGDTSIKSATFFTTLTDFSVQGEFTPFLQDDFVDAIERQVDQDGVLNSYFMSKTMSFLR
HCCCCCCCCEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SKDLIYGPAVRSYMMGEAPPAFDLLYWNGDSTNLPGKMAMEYLRGLCQGDQLASSGFDLF
CCCCEECHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHH
GESLSLKDVTVPLCAIACKTDHIAPWVDCYRGVTKMGSRSKTFILSESGHIAGIVNPPSK
CCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCC
KKYGHFTNDAVKGEAADWFEGATHNDGSWWPLWGTWLSKRSGKQIAARAPGEDGREILGP
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCHHCCC
APGTYVKEGKTN
CCCCCCCCCCCC
>Mature Secondary Structure 
SDKNEDDVKAETTAPDGPEALERLNANLAKVEGLSKRLVAAMGHRAPSDQGLSGPGQEL
CCCCCCCCEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YVKAGAAYWADAMANPTKLLEQQAQFWGQAMSTYMEMQEAIASGQLPLLDDDDLPADMAR
EEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
DKRFSNPLWRTHPYFNFVRHQYVMGSEAIRKAVSDLDGLEPQDKQRVEFFATQVIELFSP
HHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TNYFGTNPDALEKAVETDGESLVHGLENLVRDIEAHGGELLPTLADPDAFEVGTNIGTTE
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCC
GSVVYRNRMMELIQYAPTTELVHKTPLVIFPPWINKFYILDLKPQNSLIKWLVGQGYTLF
CCHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEE
VVSWKNPDDTYADVGLGDYVEDGYLAAVEQVKEITGEKQVNAVGYCIAGTTLNLTLALMK
EEEECCCCCCEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
KRGDTSIKSATFFTTLTDFSVQGEFTPFLQDDFVDAIERQVDQDGVLNSYFMSKTMSFLR
HCCCCCCCCEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SKDLIYGPAVRSYMMGEAPPAFDLLYWNGDSTNLPGKMAMEYLRGLCQGDQLASSGFDLF
CCCCEECHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHH
GESLSLKDVTVPLCAIACKTDHIAPWVDCYRGVTKMGSRSKTFILSESGHIAGIVNPPSK
CCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCC
KKYGHFTNDAVKGEAADWFEGATHNDGSWWPLWGTWLSKRSGKQIAARAPGEDGREILGP
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCHHCCC
APGTYVKEGKTN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]