Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053583
Identifier: 89053583
GI number: 89053583
Start: 1054714
End: 1055535
Strand: Direct
Name: 89053583
Synonym: Jann_1092
Alternate gene names: NA
Gene position: 1054714-1055535 (Clockwise)
Preceding gene: 89053582
Following gene: 89053586
Centisome position: 24.43
GC content: 41.61
Gene sequence:
>822_bases ATGAGTGGAGATGGCAGCCTGGCAAGAAATAACTTTGCACTAGGTTTCTTGTCAGGCTCTCTATTTTCATTGTTTCTCCT GCTGTTTTTAGATTTCTTTCAACTGTTGCCGTTTGCAGACTCTACTTTCACTGGAGCGATTCTAGGTGCCGTCTTAGCTG GAGGAATTGGCATATCTGGACAATTCTTAGTCCTTTCCCAGAACGAACGACGTCTGAACCGAGAAGAAAAACGTGCTGAA CGAGTTAAAATCGACTCACTGCTGAGTCGCATCAATCGTCTCAAAAGCACAATGTATCAAGTGCAACAGCATGTGGAATC AAGGCGTGACTTTGACAATATTGTCTTTGATAACCTTCAGCCCTTGATGAAGCCTTTCAAAATAAATGACTTACCAGAAA GGCTTGCAGAAGGTGATTTGACTTTGTCACTGCAGCTGGAGGATTATCGCCTTTTCAACTTAGTCAATGCTCTTGATAGT ATCGTTGCTAATTTCAGGTGGACACAAGAAAGCTATGAGAAGGCTGTAGAGGGTTTTCTTGAAGGAATGCAGAAGAGCGG GGATTTAAAATTTTCAGAAGGCCAATTTTCAGGCGTTGGAGAGATCAATTTGCCCGAATACCATGCGCTGACTGATTTGC AGTCACATCATATTGAGTCTGTTTATTCAGGTCTTGTTGCCTCAAAAGAGGTTTTTGATATTCTACTTGAGCATTTGCAT CGACGTCATGGTGTCAAGATTTTATTTTCTGACCCTATTAGTGATGAACAATGGGTGGATCTAAAAGATTCTGTAGACAT GGGTGATATCGTTTCAGGTTAA
Upstream 100 bases:
>100_bases GCGTTGAGGTGTTGAGGCGGCGTCTAGCCGGGGAAGAGGTGACGCAGGAGACGTCTGGGATGAGCAAGGGAGAATGGCGG GAGTTCGAGGCGGTGTTTTA
Downstream 100 bases:
>100_bases CCCAATTGGCTTTCGAGAGTCACGGTGCTCATCTGCGCTCTAAGCGAGGACGCCTTAAATCTATTCGTAGACATCTACAC AGCAGAATAGAAAATTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAE RVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDS IVANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG
Sequences:
>Translated_273_residues MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAE RVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDS IVANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG >Mature_272_residues SGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAER VKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSI VANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLHR RHGVKILFSDPISDEQWVDLKDSVDMGDIVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30793; Mature: 30662
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISG CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC QFLVLSQNERRLNREEKRAERVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQ EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSIVANFRWTQESYEKAVEGFL HHHCCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISG CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC QFLVLSQNERRLNREEKRAERVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQ EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSIVANFRWTQESYEKAVEGFL HHHCCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA