Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053546
Identifier: 89053546
GI number: 89053546
Start: 1008779
End: 1009498
Strand: Direct
Name: 89053546
Synonym: Jann_1055
Alternate gene names: NA
Gene position: 1008779-1009498 (Clockwise)
Preceding gene: 89053545
Following gene: 89053547
Centisome position: 23.36
GC content: 68.33
Gene sequence:
>720_bases ATGCTCCACTGTACGCTGGCAAAGGGCGCGGCCTGGGCAGGCGTGGCGCGGCACCTTCGCGACCAACTCTCCATGGTGGC CCCCGATCTCCTGTCCCATGGGGAGGGTCCGCATCATGACCCGGCGCGCGATTTCCACGATCAGGCGACGGAGGCCGCGA CAATGCATCTGCCGGAGGGTCGAAGCCACCTCATCGGCCACTCCTTCGGGGCCACCATCGCCCTGCGTCTGGCCCTGGAC CATCCAACGCGGGTCAAGACGCTTACCCTGATCGAGCCGGTGCTCTTTTGTGCCGCGACCGGTCCCGGACGCGCCGCCCA TGACGCCCATATTGCAGGCGTGCCACGCGCGTTGGCTGCCGGAGACACGGCACAAGCCGCCCGCATTTTTCTGGGCCTCT GGGGGGCAGAGCCCTATGACACCATGTCACCCGCCCTCCAACGCTATGTGACGGACCGCATCTGGATCCCGGATGCCTGC GCGCCGGCGCTTGACCACGACCGCGCGCAGATCCTGCCGCGCCTGATGCAACTGCCCGCGCCCACACTGCTTGTGCAGGG CGCGGCCTCTCCGCCGGTCATCGCGGAGATCATGGCGCGGCTCTCCCACCTGATCCCTGTCGCACGGGGCGAAACGATCC CCGGCGCGGCCCATATGTCGCCTGTCACCCACGCCCGTCAAACCGCCTCGGCCATCGCCGGTTTCATCGCCCAGGCCTGA
Upstream 100 bases:
>100_bases AGCATTTCTGGGGCCAGGACCGGATCGAGGATCTGGACACGTATCTCGCCAGCCTGTCGTGAGTGTGAAGACGTGGGGCA GGGGGGCGGAGACGGCCCTG
Downstream 100 bases:
>100_bases CGCGCGCGCCCGGCCACCGCGGCAAAAATTCCGGGGCCAATCGCACCTTTGATGTGAATGGTGGCAGCGCGGTACAGGTC CGCTATCCATGGCCATTGCC
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; 3-Oxoadipate Enol-Lactonase; Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLHCTLAKGAAWAGVARHLRDQLSMVAPDLLSHGEGPHHDPARDFHDQATEAATMHLPEGRSHLIGHSFGATIALRLALD HPTRVKTLTLIEPVLFCAATGPGRAAHDAHIAGVPRALAAGDTAQAARIFLGLWGAEPYDTMSPALQRYVTDRIWIPDAC APALDHDRAQILPRLMQLPAPTLLVQGAASPPVIAEIMARLSHLIPVARGETIPGAAHMSPVTHARQTASAIAGFIAQA
Sequences:
>Translated_239_residues MLHCTLAKGAAWAGVARHLRDQLSMVAPDLLSHGEGPHHDPARDFHDQATEAATMHLPEGRSHLIGHSFGATIALRLALD HPTRVKTLTLIEPVLFCAATGPGRAAHDAHIAGVPRALAAGDTAQAARIFLGLWGAEPYDTMSPALQRYVTDRIWIPDAC APALDHDRAQILPRLMQLPAPTLLVQGAASPPVIAEIMARLSHLIPVARGETIPGAAHMSPVTHARQTASAIAGFIAQA >Mature_239_residues MLHCTLAKGAAWAGVARHLRDQLSMVAPDLLSHGEGPHHDPARDFHDQATEAATMHLPEGRSHLIGHSFGATIALRLALD HPTRVKTLTLIEPVLFCAATGPGRAAHDAHIAGVPRALAAGDTAQAARIFLGLWGAEPYDTMSPALQRYVTDRIWIPDAC APALDHDRAQILPRLMQLPAPTLLVQGAASPPVIAEIMARLSHLIPVARGETIPGAAHMSPVTHARQTASAIAGFIAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25298; Mature: 25298
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHCTLAKGAAWAGVARHLRDQLSMVAPDLLSHGEGPHHDPARDFHDQATEAATMHLPEG CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCC RSHLIGHSFGATIALRLALDHPTRVKTLTLIEPVLFCAATGPGRAAHDAHIAGVPRALAA CHHHHHCHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHC GDTAQAARIFLGLWGAEPYDTMSPALQRYVTDRIWIPDACAPALDHDRAQILPRLMQLPA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC PTLLVQGAASPPVIAEIMARLSHLIPVARGETIPGAAHMSPVTHARQTASAIAGFIAQA CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLHCTLAKGAAWAGVARHLRDQLSMVAPDLLSHGEGPHHDPARDFHDQATEAATMHLPEG CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCC RSHLIGHSFGATIALRLALDHPTRVKTLTLIEPVLFCAATGPGRAAHDAHIAGVPRALAA CHHHHHCHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHC GDTAQAARIFLGLWGAEPYDTMSPALQRYVTDRIWIPDACAPALDHDRAQILPRLMQLPA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC PTLLVQGAASPPVIAEIMARLSHLIPVARGETIPGAAHMSPVTHARQTASAIAGFIAQA CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA