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The map label for this gene is atpC

Identifier: 89053541

GI number: 89053541

Start: 1005422

End: 1005820

Strand: Direct

Name: atpC

Synonym: Jann_1050

Alternate gene names: 89053541

Gene position: 1005422-1005820 (Clockwise)

Preceding gene: 89053540

Following gene: 89053542

Centisome position: 23.28

GC content: 62.66

Gene sequence:

>399_bases
ATGGCAACCATGCAATTCGATCTCGTCTCACCTGAGCGCCGCCTGGCGTCCATGGAGGTGACCGAGGTTCAGATCCCCGG
CGCCGATGGTGATCTGACCGCGATGCCGGACCATTCACCGATGATCACCACCCTGCGTCCCGGCGTGTTGAAGGTGTCCG
GCGCGGAGGGTGAGAAAAGCTACTTCGTTACCGGTGGTTTCGCGGATATCGCGGGGCCATCCGCCACGATCCTGGCCGAG
CGGGCGATGCCCGTCGAAGAAGTGACCGGAGAGATCGTTGAAGAGCTGATCAAGGCCTCGGAAGAGCAGAAATCCGCGGC
GTCCGACGGTGCGGCGGATGCGGCCGCCAAATACCACGCGGATCTGACCATGACGCTGGACGCGATTGTCGGCCGATAA

Upstream 100 bases:

>100_bases
TCCCCTCCCGTCCACCTAGGATGCCAAATCCGACGGTGGACCCCTGGTGGACGGGAGGGGAGGCGGGGCGGGTGGTGTAA
CAAAAGAATCGGAGGCCGAT

Downstream 100 bases:

>100_bases
GTTTTGCCTGACCTGACAGCGCGCCCTCGGCCCACCCGCCGGGGGCGTTTTTGTATCAGACTTTCGGAAAATCGAGATGG
GCCCGATATTTTGTTCAGCA

Product: ATP synthase F1 subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MATMQFDLVSPERRLASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKSYFVTGGFADIAGPSATILAE
RAMPVEEVTGEIVEELIKASEEQKSAASDGAADAAAKYHADLTMTLDAIVGR

Sequences:

>Translated_132_residues
MATMQFDLVSPERRLASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKSYFVTGGFADIAGPSATILAE
RAMPVEEVTGEIVEELIKASEEQKSAASDGAADAAAKYHADLTMTLDAIVGR
>Mature_131_residues
ATMQFDLVSPERRLASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKSYFVTGGFADIAGPSATILAER
AMPVEEVTGEIVEELIKASEEQKSAASDGAADAAAKYHADLTMTLDAIVGR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=114, Percent_Identity=28.0701754385965, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_JANSC (Q28TJ5)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508992.1
- ProteinModelPortal:   Q28TJ5
- SMR:   Q28TJ5
- STRING:   Q28TJ5
- GeneID:   3933494
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_1050
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   HISIISF
- PhylomeDB:   Q28TJ5
- BioCyc:   JSP290400:JANN_1050-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13825; Mature: 13694

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMQFDLVSPERRLASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKS
CCCEEEECCCHHHHHHCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEEEECCCCCCE
YFVTGGFADIAGPSATILAERAMPVEEVTGEIVEELIKASEEQKSAASDGAADAAAKYHA
EEEECCCHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHC
DLTMTLDAIVGR
CCEEEEEHHHCC
>Mature Secondary Structure 
ATMQFDLVSPERRLASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKS
CCEEEECCCHHHHHHCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEEEECCCCCCE
YFVTGGFADIAGPSATILAERAMPVEEVTGEIVEELIKASEEQKSAASDGAADAAAKYHA
EEEECCCHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHC
DLTMTLDAIVGR
CCEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA