Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is hisC
Identifier: 89053525
GI number: 89053525
Start: 987219
End: 988301
Strand: Direct
Name: hisC
Synonym: Jann_1034
Alternate gene names: 89053525
Gene position: 987219-988301 (Clockwise)
Preceding gene: 89053524
Following gene: 89053526
Centisome position: 22.86
GC content: 65.0
Gene sequence:
>1083_bases ATGACCGCTCCCATCCGCCCGCAACCCGGCATTCTTGACATCGCCTTGTATCAGGGCGGGGCCTCCAAGATTGCGGGCCA TGCGGATCCGTTGAAGCTGTCGTCGAACGAGAACCCATTCGGGCCGTCTCCGGCGGCTGTGCAGGCCATGGCAGACGCGG TGGCCAGCAGTCACCGCTACCCCAACACCGATCACGCAGACCTGCGCGCGGCGATTTCGGAGATCCACGGGCTGGAGGCC GACAATATCATCTGCGGTGTGGGCAGTGACGAGGTGATCCACTTCCTCTGCCAATGCTATGCCGGGCCGGGGGATGAGGT GCTCTACACCCAGCACGGGTTCGGCATGTACCCGATTGCGGCGAAGGCTGCGGGGGCCACGCCGGTGCAGGTGGCGGAGG ACGCGCGCCATGTGGATGTGGACGCACTGATTGCCGGGATCACGCCCGCCACCCGGCTCATTTTCATCGCCAACCCCTCC AACCCCTGTGCGACGATGATCGACAACGGAGAGATCACGCGCCTGGCCGATGCGTTGCCGGATCAATGCCTGCTGATCCT TGATGGGGCCTATGTGGAGTTCGCGGACGGCTACGATGGCGGCAAGAATCTGGTGGAGGCGCGCGACAACGTCGTGATGA CGCGCACGTTTTCCAAGGTCTACGGGCTAGGTGGGCTGCGGGTGGGCTACGGGTATGGCCCGCGCCATGTGATCGACACG CTCAACCGCATTCGCGGGCCGTTCAACCTGTCGGGAATGGCGCTGGCCGGGGCCGAGGCGGCGGTGCGCGACGTGGATTG GGTGAACGAGTGCTTGCGGGTGAATGCCGATGAACGCGCCCGGCTGGTGGGCGGTTTGCGCCAATTGGGTCTGGCTTGCG ACGACAGCCACGCCAATTTTGTGCTGGCCCGGTTCGCCAGTGAAGCCGCCGCAGATGCCGCTGATGCGCATCTGAAGCGC GACGGCATCATTGTACGCGCGCCCAAATCATACGGCCTGCCCGACTGCCTGCGCATCACCGTGGGCCGGCCCGAAGATAA CAGCCGTGTGCTTGCGTCCCTAACGGCACTGGTGGCGGCGTGA
Upstream 100 bases:
>100_bases TTGCCATAGATATCGACCCGCAGAACTTCTTCTGAAAACGGTTCCCCCCCGCCGTCGCGCACGGTAGAAGTTTGCGAAAT CGTAAACGGACGCTTTGCCC
Downstream 100 bases:
>100_bases ACGTTCTGTACAACCGCGTTGCCCTGATTGGACTGGGTCTGATTGCGGGTTCCATGGCCCATGCCATGCGCCGCGCGGGC CTTGCGGGGGAAATCGTGGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRYPNTDHADLRAAISEIHGLEA DNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIAAKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPS NPCATMIDNGEITRLADALPDQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDT LNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANFVLARFASEAAADAADAHLKR DGIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA
Sequences:
>Translated_360_residues MTAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRYPNTDHADLRAAISEIHGLEA DNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIAAKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPS NPCATMIDNGEITRLADALPDQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDT LNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANFVLARFASEAAADAADAHLKR DGIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA >Mature_359_residues TAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRYPNTDHADLRAAISEIHGLEAD NIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIAAKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPSN PCATMIDNGEITRLADALPDQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDTL NRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANFVLARFASEAAADAADAHLKRD GIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=354, Percent_Identity=26.5536723163842, Blast_Score=115, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17567369, Length=235, Percent_Identity=24.6808510638298, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=350, Percent_Identity=28.2857142857143, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_JANSC (Q28TL1)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508976.1 - ProteinModelPortal: Q28TL1 - SMR: Q28TL1 - STRING: Q28TL1 - GeneID: 3933478 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_1034 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: NPANILC - PhylomeDB: Q28TL1 - ProtClustDB: PRK02731 - BioCyc: JSP290400:JANN_1034-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 37979; Mature: 37848
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRY CCCCCCCCCCEEEEEEECCCCHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC PNTDHADLRAAISEIHGLEADNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIA CCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH AKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPSNPCATMIDNGEITRLADALP HHCCCCCCHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHCCC DQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDT CCEEEEEECCEEEECCCCCCCHHHHHHCCCEEEEEEHHHHHCCCCEEECCCCCHHHHHHH LNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANF HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCCC VLARFASEAAADAADAHLKRDGIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRY CCCCCCCCCEEEEEEECCCCHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC PNTDHADLRAAISEIHGLEADNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIA CCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH AKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPSNPCATMIDNGEITRLADALP HHCCCCCCHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHCCC DQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDT CCEEEEEECCEEEECCCCCCCHHHHHHCCCEEEEEEHHHHHCCCCEEECCCCCHHHHHHH LNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANF HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCCC VLARFASEAAADAADAHLKRDGIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA