Click here to switch to the map view.

The map label for this gene is 89053408

Identifier: 89053408

GI number: 89053408

Start: 872381

End: 873826

Strand: Direct

Name: 89053408

Synonym: Jann_0917

Alternate gene names: NA

Gene position: 872381-873826 (Clockwise)

Preceding gene: 89053407

Following gene: 89053410

Centisome position: 20.2

GC content: 67.63

Gene sequence:

>1446_bases
ATGACGGCAGGGCAATGGATGGCCGCCCGCGCGCCCTGGCTGATGCTGGCGGTGTTCCTGGGTCAGGCCGGGGTGCTGAG
CCTTTTGCGGTCCGGCACCAGCTATGACGGCGCGGAACAGCTGATCTACACACAGGTGTTCGATTTCGGCTACGGACGCT
CGCAACCGCCGTTGTTCACCTGGATGCTGCTGGGGATGCAGCAGGTTTTTGGCGTCAGTCAGATCGCAGAGAACCTGCTG
AAATTTGCGCTTTTGGGGGCCGGGTTTGCGGCAATCTGGCGGATCGCCGTGGCGCTTGGGTCGGACCGCGTGGTGGCGGC
GGCGGCGATGGTGTCGCTGTTTCTGACGGTGGAGATCGGGTTCGAAGCGCAGCGCAACTACACCCATTCCGTCCTGCTGT
TCGCGCTGACGGGCTGGATCGCGGTGATCTACCTGGGCCTGTTAGAGCGGCGGTCGGTGGGGCAGTATCTGCTGATGGGC
GCGCTGATGGGCGCGGTCATGCTGAGCAAATACAACGCCGCGTTGATGATCTTCGCGCTGGTCGTGGCTGATCTGTCCCT
GCGTGAGGCGGGCGTTTTTCGCGCCAAGGCCAGCGGTCTGGTCTGGTTGGTGGCGGCTGTGGTCGGCTTGCCCCACGCGA
TCTGGGCGGTTGCGAACCCCGACGAGGTTTTTGCGTTGAGCGCGGGGTTCGTGGGCGGTCAAGCCCCGTCTTTGGCCGCG
ACAGCCGTGCGGGGCGTGGGCGCGTATCTGGAGGCCGCGCTGGGGTTGTTGGGACCGTTGGCCTTGGTCGCCGGCATCGC
CATGGTGTGGCGGCAGCGCCCGGCGGTTGCGGTGCCGAAGGGGGCAGAGGCGCGCCGGGTCCTGTGGCGTTGGGTGCTGC
TGATGGCCATCGCCGGGTTGCTGGTGACATTGCTGACCACGGCGACGGTGGTGCGGATGCGCTGGCTTATCCCGCTATGC
GTCCCGCTGGTGCCGCTGTCGATCTGCGCGGTCCTTGCACGCGCGCCAAGGGCGACGGGCGGAGTGATGGCGGTTGGCCT
GATCCTCGGGGTGGTTTCGGTCGCTGGGCAATGGGTGCAGAGCCTGTGGATCAACCCGCGCACCGATTACGATTACGCGG
CCCTGGCCACGGATATGGCGGAGGCCGGGTTGCCGATGGATATCGTCGCGGTGAGCTATGCGGAGTTCGCCAATTTGCGG
CTTTACGGGGTGGACAGGGTTGTGGTGCCCGTCCTGCCAGACCCGGCGGCATTGGCCCCCGACGCCGCCACCGCGATCTG
GGCGGCGGGGCGCGACGGGGACGCCGCGCGGGTGGAGGCCTTCGCCGGTGCTCTGGGGCTGTGCGCGGACGGACCCGGCA
CGCCCCGCACATTGGCGCGCCGCCACGGCGAGGGCGGGTTGGAGGTGTTCGTAATGCCGGTAACGGCAGCCGCCTGCGCT
GACTAG

Upstream 100 bases:

>100_bases
TGACGATCATCGGCATCTTCGTCCTGCGCACGCTGGTACTGCCCGCCTTGCTGATGTGGTCAGTCATGGCCCTGCTTCGG
CGCAGCGTGGGGTAGGGCCG

Downstream 100 bases:

>100_bases
GGAAAGTGGGACCGCAGGGTTCCGGCTGCAATTTCGGCCTGCATGACGGGCAGGTAGTCGGCGGGGTTGTGCAGCGCCTT
GGTGACGCCGGGCACCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MTAGQWMAARAPWLMLAVFLGQAGVLSLLRSGTSYDGAEQLIYTQVFDFGYGRSQPPLFTWMLLGMQQVFGVSQIAENLL
KFALLGAGFAAIWRIAVALGSDRVVAAAAMVSLFLTVEIGFEAQRNYTHSVLLFALTGWIAVIYLGLLERRSVGQYLLMG
ALMGAVMLSKYNAALMIFALVVADLSLREAGVFRAKASGLVWLVAAVVGLPHAIWAVANPDEVFALSAGFVGGQAPSLAA
TAVRGVGAYLEAALGLLGPLALVAGIAMVWRQRPAVAVPKGAEARRVLWRWVLLMAIAGLLVTLLTTATVVRMRWLIPLC
VPLVPLSICAVLARAPRATGGVMAVGLILGVVSVAGQWVQSLWINPRTDYDYAALATDMAEAGLPMDIVAVSYAEFANLR
LYGVDRVVVPVLPDPAALAPDAATAIWAAGRDGDAARVEAFAGALGLCADGPGTPRTLARRHGEGGLEVFVMPVTAAACA
D

Sequences:

>Translated_481_residues
MTAGQWMAARAPWLMLAVFLGQAGVLSLLRSGTSYDGAEQLIYTQVFDFGYGRSQPPLFTWMLLGMQQVFGVSQIAENLL
KFALLGAGFAAIWRIAVALGSDRVVAAAAMVSLFLTVEIGFEAQRNYTHSVLLFALTGWIAVIYLGLLERRSVGQYLLMG
ALMGAVMLSKYNAALMIFALVVADLSLREAGVFRAKASGLVWLVAAVVGLPHAIWAVANPDEVFALSAGFVGGQAPSLAA
TAVRGVGAYLEAALGLLGPLALVAGIAMVWRQRPAVAVPKGAEARRVLWRWVLLMAIAGLLVTLLTTATVVRMRWLIPLC
VPLVPLSICAVLARAPRATGGVMAVGLILGVVSVAGQWVQSLWINPRTDYDYAALATDMAEAGLPMDIVAVSYAEFANLR
LYGVDRVVVPVLPDPAALAPDAATAIWAAGRDGDAARVEAFAGALGLCADGPGTPRTLARRHGEGGLEVFVMPVTAAACA
D
>Mature_480_residues
TAGQWMAARAPWLMLAVFLGQAGVLSLLRSGTSYDGAEQLIYTQVFDFGYGRSQPPLFTWMLLGMQQVFGVSQIAENLLK
FALLGAGFAAIWRIAVALGSDRVVAAAAMVSLFLTVEIGFEAQRNYTHSVLLFALTGWIAVIYLGLLERRSVGQYLLMGA
LMGAVMLSKYNAALMIFALVVADLSLREAGVFRAKASGLVWLVAAVVGLPHAIWAVANPDEVFALSAGFVGGQAPSLAAT
AVRGVGAYLEAALGLLGPLALVAGIAMVWRQRPAVAVPKGAEARRVLWRWVLLMAIAGLLVTLLTTATVVRMRWLIPLCV
PLVPLSICAVLARAPRATGGVMAVGLILGVVSVAGQWVQSLWINPRTDYDYAALATDMAEAGLPMDIVAVSYAEFANLRL
YGVDRVVVPVLPDPAALAPDAATAIWAAGRDGDAARVEAFAGALGLCADGPGTPRTLARRHGEGGLEVFVMPVTAAACAD

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50601; Mature: 50470

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGQWMAARAPWLMLAVFLGQAGVLSLLRSGTSYDGAEQLIYTQVFDFGYGRSQPPLFT
CCCCCCHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
WMLLGMQQVFGVSQIAENLLKFALLGAGFAAIWRIAVALGSDRVVAAAAMVSLFLTVEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEC
FEAQRNYTHSVLLFALTGWIAVIYLGLLERRSVGQYLLMGALMGAVMLSKYNAALMIFAL
CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVADLSLREAGVFRAKASGLVWLVAAVVGLPHAIWAVANPDEVFALSAGFVGGQAPSLAA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCCCCCHHHH
TAVRGVGAYLEAALGLLGPLALVAGIAMVWRQRPAVAVPKGAEARRVLWRWVLLMAIAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVTLLTTATVVRMRWLIPLCVPLVPLSICAVLARAPRATGGVMAVGLILGVVSVAGQWVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SLWINPRTDYDYAALATDMAEAGLPMDIVAVSYAEFANLRLYGVDRVVVPVLPDPAALAP
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCC
DAATAIWAAGRDGDAARVEAFAGALGLCADGPGTPRTLARRHGEGGLEVFVMPVTAAACA
CHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHC
D
C
>Mature Secondary Structure 
TAGQWMAARAPWLMLAVFLGQAGVLSLLRSGTSYDGAEQLIYTQVFDFGYGRSQPPLFT
CCCCCHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
WMLLGMQQVFGVSQIAENLLKFALLGAGFAAIWRIAVALGSDRVVAAAAMVSLFLTVEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEC
FEAQRNYTHSVLLFALTGWIAVIYLGLLERRSVGQYLLMGALMGAVMLSKYNAALMIFAL
CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVADLSLREAGVFRAKASGLVWLVAAVVGLPHAIWAVANPDEVFALSAGFVGGQAPSLAA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCCCCCHHHH
TAVRGVGAYLEAALGLLGPLALVAGIAMVWRQRPAVAVPKGAEARRVLWRWVLLMAIAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVTLLTTATVVRMRWLIPLCVPLVPLSICAVLARAPRATGGVMAVGLILGVVSVAGQWVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SLWINPRTDYDYAALATDMAEAGLPMDIVAVSYAEFANLRLYGVDRVVVPVLPDPAALAP
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCC
DAATAIWAAGRDGDAARVEAFAGALGLCADGPGTPRTLARRHGEGGLEVFVMPVTAAACA
CHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA