Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053407

Identifier: 89053407

GI number: 89053407

Start: 871485

End: 872375

Strand: Direct

Name: 89053407

Synonym: Jann_0916

Alternate gene names: NA

Gene position: 871485-872375 (Clockwise)

Preceding gene: 89053406

Following gene: 89053408

Centisome position: 20.18

GC content: 70.03

Gene sequence:

>891_bases
GTGTTGCAGGGGGAGCGGCGCCGTGGCGACACGGTGCGGGGCGGACAGCGTCGCGGTCTTCGCGCCATGGCATTTGCAAT
TGTCGGGGTCATTGCGCTCGCGGTGGGTCTGTCGGACCTGTCGCGGGGCGGCGGGGTGAACCCCACCCTACCGCCCGCCG
TGGAGGCCGCTGAGGAAATCGCGGTGGTCACAGCCGGGGTCTATGTGTCCCTGCGCGCGATCAACGCGGCACTGTCGGCG
GCACAGGAGGTGGAGATTGGCGCGTCCATCGGGGCGCAGGCGAGCCTGCAACCCCTGAAAGTTCTGGAGCCCGTGGACGA
CACGGTGGAGCGGGTCGCGGACGTAGTTTTTGCCGTGGCCGCCGGGGCCGCACTGGTGGTTGTGGGGCTGGAGCCGGTGG
CGGCCATTGGCCTGACGGTTCTTGGCCTCGGCCTTTTGGGCATGGCGGGTGCGGCTGTCATGGGGCGCGCGTCCGTGGAG
ATGGCAAGCCTGCGCGCGGTGCGTCTGGGCGCGGCGCTGGGGCTGGTGTTGCCGCTGGTCTTTGCAGGCGGCGTCTGGCT
GGGCGACCGGGCCACCGCCCCGCAATGGGCGGCGGCGATGGCGCAGCTGGAGACGGTCACCGGAGAGGCCCGCGTGCTGA
TCGGCGCGGGCGAGGAGGAGTTGTTGGCCGACGCGGAGGGCGGCTTGTTCTCGGGCTTTCTGGGGGCGCTTTCCGACGCA
ACAGCCTCCGTCCAGAGCTATGTCGCGGCGGCGCAGGTCTTCACCCAACAGGCCGACGCGCTGTTCAACGCGACGCTGAC
GATCATCGGCATCTTCGTCCTGCGCACGCTGGTACTGCCCGCCTTGCTGATGTGGTCAGTCATGGCCCTGCTTCGGCGCA
GCGTGGGGTAG

Upstream 100 bases:

>100_bases
TCGCCGACGGGCACCGGCCACCGGATCTGGTTGTGCCGAGCATGTTGTGAGCCAACGGCCTGAGCCTCCGCTGCGCGCGC
CCGCTGTGTCGGAGCGCCCG

Downstream 100 bases:

>100_bases
GGCCGATGACGGCAGGGCAATGGATGGCCGCCCGCGCGCCCTGGCTGATGCTGGCGGTGTTCCTGGGTCAGGCCGGGGTG
CTGAGCCTTTTGCGGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLQGERRRGDTVRGGQRRGLRAMAFAIVGVIALAVGLSDLSRGGGVNPTLPPAVEAAEEIAVVTAGVYVSLRAINAALSA
AQEVEIGASIGAQASLQPLKVLEPVDDTVERVADVVFAVAAGAALVVVGLEPVAAIGLTVLGLGLLGMAGAAVMGRASVE
MASLRAVRLGAALGLVLPLVFAGGVWLGDRATAPQWAAAMAQLETVTGEARVLIGAGEEELLADAEGGLFSGFLGALSDA
TASVQSYVAAAQVFTQQADALFNATLTIIGIFVLRTLVLPALLMWSVMALLRRSVG

Sequences:

>Translated_296_residues
MLQGERRRGDTVRGGQRRGLRAMAFAIVGVIALAVGLSDLSRGGGVNPTLPPAVEAAEEIAVVTAGVYVSLRAINAALSA
AQEVEIGASIGAQASLQPLKVLEPVDDTVERVADVVFAVAAGAALVVVGLEPVAAIGLTVLGLGLLGMAGAAVMGRASVE
MASLRAVRLGAALGLVLPLVFAGGVWLGDRATAPQWAAAMAQLETVTGEARVLIGAGEEELLADAEGGLFSGFLGALSDA
TASVQSYVAAAQVFTQQADALFNATLTIIGIFVLRTLVLPALLMWSVMALLRRSVG
>Mature_296_residues
MLQGERRRGDTVRGGQRRGLRAMAFAIVGVIALAVGLSDLSRGGGVNPTLPPAVEAAEEIAVVTAGVYVSLRAINAALSA
AQEVEIGASIGAQASLQPLKVLEPVDDTVERVADVVFAVAAGAALVVVGLEPVAAIGLTVLGLGLLGMAGAAVMGRASVE
MASLRAVRLGAALGLVLPLVFAGGVWLGDRATAPQWAAAMAQLETVTGEARVLIGAGEEELLADAEGGLFSGFLGALSDA
TASVQSYVAAAQVFTQQADALFNATLTIIGIFVLRTLVLPALLMWSVMALLRRSVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29959; Mature: 29959

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGERRRGDTVRGGQRRGLRAMAFAIVGVIALAVGLSDLSRGGGVNPTLPPAVEAAEEI
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AVVTAGVYVSLRAINAALSAAQEVEIGASIGAQASLQPLKVLEPVDDTVERVADVVFAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
AGAALVVVGLEPVAAIGLTVLGLGLLGMAGAAVMGRASVEMASLRAVRLGAALGLVLPLV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGVWLGDRATAPQWAAAMAQLETVTGEARVLIGAGEEELLADAEGGLFSGFLGALSDA
HHCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH
TASVQSYVAAAQVFTQQADALFNATLTIIGIFVLRTLVLPALLMWSVMALLRRSVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQGERRRGDTVRGGQRRGLRAMAFAIVGVIALAVGLSDLSRGGGVNPTLPPAVEAAEEI
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AVVTAGVYVSLRAINAALSAAQEVEIGASIGAQASLQPLKVLEPVDDTVERVADVVFAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
AGAALVVVGLEPVAAIGLTVLGLGLLGMAGAAVMGRASVEMASLRAVRLGAALGLVLPLV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGVWLGDRATAPQWAAAMAQLETVTGEARVLIGAGEEELLADAEGGLFSGFLGALSDA
HHCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH
TASVQSYVAAAQVFTQQADALFNATLTIIGIFVLRTLVLPALLMWSVMALLRRSVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA