Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is hisJ [H]
Identifier: 89053401
GI number: 89053401
Start: 865519
End: 866319
Strand: Direct
Name: hisJ [H]
Synonym: Jann_0910
Alternate gene names: 89053401
Gene position: 865519-866319 (Clockwise)
Preceding gene: 89053400
Following gene: 89053402
Centisome position: 20.04
GC content: 62.42
Gene sequence:
>801_bases ATGACTCGTTTTTTCGCCGCCGCCTTGGCCGCCCCTCTGGCCGCTTTGATGCCTTTTGCCGCCGCCGCCGATGGGCATTT GCCTGATCTGGGCGGGCAGGAGGTCGTGATCGTCACGGAAAACGCCTATCCGCCGTTGCAATTCGTGGACCCCGTGAGTG GCCTTGCGATTGGGTGGGAATATGACGCGGTGGAGATCCTGGCGGAGCGCCTGAACTTCACGCCCGTCATCGAGAATATC AGCTGGGACGCGATGATCCCCGCCGTCTCGGGCGGGCAGTACGATATGGGCATGACGGGCATCACCATCCGCGAAGATCG CGATGAGCTGGTCGATTTCTCCGTCCCCTACATGGTCAGCCAGATGCGCATGCTGGTGGCCGCCGATGAGACGCGCTTTG ACGATGCCGAGAGCTTTGCCGCAGACGAGGATCTGTTGATCGGGACGCAGGCGGGCACCACGCCGTTCTATGTGGGCGTT TACGATGTGCTGGATGGGGATGAGGCCAATCCGCGCCTTGTTCTGCTGGAGACGATCCCGGCGGCGATCCAGGCGCTGAT CACCGGCGATGTGGATATGGTGCTGGCCGATAGCGCGGGTGGGCAGGGCTATGTCAGCGCCAATCCCGACCGGTTGCAGA TGATCGGGGAGCCGCTTGGCACCGAGGAATTTGGCTTCATCTTCCCCAATGACAGCGAGCTGACGGCGGCGATCAACGCC GGTCTGGACAGCATGCGCGAGGATGGGACCCTGGAGGAGTTGGACCAGCGCTGGTTTGTCGATTACGCGCTCGGCCAGTA A
Upstream 100 bases:
>100_bases TTTGCGACGGGGTTTGACGCGGATTGGACGAAAGGCCGGGTCAGGGCTGGACGGCGGGGCCACGCGCGCCATACTGGCGA AAACCAACCGGGAGCAAGAT
Downstream 100 bases:
>100_bases CGAAACAAAGGTGCGCCGGGGGCTCTCGGCGCGCCGTCCCTGATGCTTTCCCGCTCCCCCCAGGACCAGGATTTCCCGTG GTGGCTTGTCGCTTTGGGCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTRFFAAALAAPLAALMPFAAAADGHLPDLGGQEVVIVTENAYPPLQFVDPVSGLAIGWEYDAVEILAERLNFTPVIENI SWDAMIPAVSGGQYDMGMTGITIREDRDELVDFSVPYMVSQMRMLVAADETRFDDAESFAADEDLLIGTQAGTTPFYVGV YDVLDGDEANPRLVLLETIPAAIQALITGDVDMVLADSAGGQGYVSANPDRLQMIGEPLGTEEFGFIFPNDSELTAAINA GLDSMREDGTLEELDQRWFVDYALGQ
Sequences:
>Translated_266_residues MTRFFAAALAAPLAALMPFAAAADGHLPDLGGQEVVIVTENAYPPLQFVDPVSGLAIGWEYDAVEILAERLNFTPVIENI SWDAMIPAVSGGQYDMGMTGITIREDRDELVDFSVPYMVSQMRMLVAADETRFDDAESFAADEDLLIGTQAGTTPFYVGV YDVLDGDEANPRLVLLETIPAAIQALITGDVDMVLADSAGGQGYVSANPDRLQMIGEPLGTEEFGFIFPNDSELTAAINA GLDSMREDGTLEELDQRWFVDYALGQ >Mature_265_residues TRFFAAALAAPLAALMPFAAAADGHLPDLGGQEVVIVTENAYPPLQFVDPVSGLAIGWEYDAVEILAERLNFTPVIENIS WDAMIPAVSGGQYDMGMTGITIREDRDELVDFSVPYMVSQMRMLVAADETRFDDAESFAADEDLLIGTQAGTTPFYVGVY DVLDGDEANPRLVLLETIPAAIQALITGDVDMVLADSAGGQGYVSANPDRLQMIGEPLGTEEFGFIFPNDSELTAAINAG LDSMREDGTLEELDQRWFVDYALGQ
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=255, Percent_Identity=26.2745098039216, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788228, Length=258, Percent_Identity=27.1317829457364, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=22.4066390041494, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=22.0720720720721, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28686; Mature: 28555
Theoretical pI: Translated: 3.51; Mature: 3.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFFAAALAAPLAALMPFAAAADGHLPDLGGQEVVIVTENAYPPLQFVDPVSGLAIGWE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCEEECCC YDAVEILAERLNFTPVIENISWDAMIPAVSGGQYDMGMTGITIREDRDELVDFSVPYMVS HHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHH QMRMLVAADETRFDDAESFAADEDLLIGTQAGTTPFYVGVYDVLDGDEANPRLVLLETIP HHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEHHH AAIQALITGDVDMVLADSAGGQGYVSANPDRLQMIGEPLGTEEFGFIFPNDSELTAAINA HHHHHHHCCCEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCEEEECCCCCEEHHHHH GLDSMREDGTLEELDQRWFVDYALGQ CHHHHHCCCCHHHHHHHHEHEECCCC >Mature Secondary Structure TRFFAAALAAPLAALMPFAAAADGHLPDLGGQEVVIVTENAYPPLQFVDPVSGLAIGWE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCEEECCC YDAVEILAERLNFTPVIENISWDAMIPAVSGGQYDMGMTGITIREDRDELVDFSVPYMVS HHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHH QMRMLVAADETRFDDAESFAADEDLLIGTQAGTTPFYVGVYDVLDGDEANPRLVLLETIP HHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEHHH AAIQALITGDVDMVLADSAGGQGYVSANPDRLQMIGEPLGTEEFGFIFPNDSELTAAINA HHHHHHHCCCEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCEEEECCCCCEEHHHHH GLDSMREDGTLEELDQRWFVDYALGQ CHHHHHCCCCHHHHHHHHEHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]