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The map label for this gene is ycgM [C]

Identifier: 89053360

GI number: 89053360

Start: 825338

End: 826153

Strand: Direct

Name: ycgM [C]

Synonym: Jann_0869

Alternate gene names: 89053360

Gene position: 825338-826153 (Clockwise)

Preceding gene: 89053346

Following gene: 89053361

Centisome position: 19.11

GC content: 62.25

Gene sequence:

>816_bases
ATGGGATTGATGTGGTTCGAAAAAGACGGTGAGACGCGGCTTGGCGCGCGGTCCGAGGCGGGCATCACGGCCCTTACCGG
GCAGGACATGGTCGCAGCTTTGGCCGAGACACCCGTGCAGGGTGCTGCGGTATCGGACCCGGTCACGGCCCTGCCGCCGG
TCACGCCAACCGCCAAGATCCTGTGTGTTGCGTTGAACTACGTGGACCACGCGAAGGAGGCGAACCAGCCGGTTCCGGAA
ACGCCCATTGTCTTCTTCAAGACCTTTGATGCGATGATTGCAGGCGGGGCGCCGATCCGTGCGCCCCGGATGATCACGCA
ACTCGACTACGAGGGTGAACTGGCGCTGATCATCGGCAAACGTGGCTTTGACATCGCCAAGACCGACGCCTGGGATCACA
TCGCGGGCGTCACCACGCTGAACGATGTCTCGGCCCGCGATATCTTCAAGGTCAAGGCCGGTGCTGCGAGCCATCTTGAC
TGGTTTTCGGGCAAATGCCTGAACCAGTCCACGCCCATCGGGCCCGAGGTCTTTCCGCTATCGGCCATCGAAGACGATCT
GAAGGCTGGCACCACCCGCATCAGATGCCTGGTGAACGGTGAGGTGCGCCAGGATGCGCCCGTCGCAGACATGATCTTCG
ACATTCCAACGATGATCGCCTTCATCTCAAGCCGTATCCCGCTGAACCCCGGTGACATTATCGCCACCGGCACGCCCCCC
GGCGTCGGCGCGGGCACGGACCGCTATCTGAGCAAAGGTGACGTGGTCCGGGTTGAGGTGACAGGATTGCCGCCGATGGA
AAACACGGTGGCCTGA

Upstream 100 bases:

>100_bases
ATGAGGTTTCGGCACATTATAATATAATCACACATTTTTTGGTTGTATTTGTGTCAAACGTGCGTATGAAAGATCAACGC
AAGCAGAAACCGGGTGTGAC

Downstream 100 bases:

>100_bases
GCGACCGGATGACAGGCCACGCGCGGGGGGAGAGCCTGCGGGGCTGACAAGGGGGAGGGGCGTTAGCGCGCCACCCAGAC
AGACATTAAGGGAGGACAGA

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MGLMWFEKDGETRLGARSEAGITALTGQDMVAALAETPVQGAAVSDPVTALPPVTPTAKILCVALNYVDHAKEANQPVPE
TPIVFFKTFDAMIAGGAPIRAPRMITQLDYEGELALIIGKRGFDIAKTDAWDHIAGVTTLNDVSARDIFKVKAGAASHLD
WFSGKCLNQSTPIGPEVFPLSAIEDDLKAGTTRIRCLVNGEVRQDAPVADMIFDIPTMIAFISSRIPLNPGDIIATGTPP
GVGAGTDRYLSKGDVVRVEVTGLPPMENTVA

Sequences:

>Translated_271_residues
MGLMWFEKDGETRLGARSEAGITALTGQDMVAALAETPVQGAAVSDPVTALPPVTPTAKILCVALNYVDHAKEANQPVPE
TPIVFFKTFDAMIAGGAPIRAPRMITQLDYEGELALIIGKRGFDIAKTDAWDHIAGVTTLNDVSARDIFKVKAGAASHLD
WFSGKCLNQSTPIGPEVFPLSAIEDDLKAGTTRIRCLVNGEVRQDAPVADMIFDIPTMIAFISSRIPLNPGDIIATGTPP
GVGAGTDRYLSKGDVVRVEVTGLPPMENTVA
>Mature_270_residues
GLMWFEKDGETRLGARSEAGITALTGQDMVAALAETPVQGAAVSDPVTALPPVTPTAKILCVALNYVDHAKEANQPVPET
PIVFFKTFDAMIAGGAPIRAPRMITQLDYEGELALIIGKRGFDIAKTDAWDHIAGVTTLNDVSARDIFKVKAGAASHLDW
FSGKCLNQSTPIGPEVFPLSAIEDDLKAGTTRIRCLVNGEVRQDAPVADMIFDIPTMIAFISSRIPLNPGDIIATGTPPG
VGAGTDRYLSKGDVVRVEVTGLPPMENTVA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=225, Percent_Identity=40, Blast_Score=157, Evalue=6e-39,
Organism=Homo sapiens, GI156231349, Length=225, Percent_Identity=40, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI215422413, Length=205, Percent_Identity=34.6341463414634, Blast_Score=114, Evalue=8e-26,
Organism=Homo sapiens, GI66348062, Length=184, Percent_Identity=36.4130434782609, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI13654274, Length=184, Percent_Identity=36.4130434782609, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI1787428, Length=208, Percent_Identity=32.6923076923077, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17557057, Length=205, Percent_Identity=37.5609756097561, Blast_Score=123, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324161, Length=232, Percent_Identity=31.4655172413793, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28572127, Length=229, Percent_Identity=35.8078602620087, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI28571789, Length=205, Percent_Identity=34.6341463414634, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24663695, Length=222, Percent_Identity=32.8828828828829, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 28697; Mature: 28566

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMWFEKDGETRLGARSEAGITALTGQDMVAALAETPVQGAAVSDPVTALPPVTPTAKI
CCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
LCVALNYVDHAKEANQPVPETPIVFFKTFDAMIAGGAPIRAPRMITQLDYEGELALIIGK
HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHEEECCCCCEEEEEEC
RGFDIAKTDAWDHIAGVTTLNDVSARDIFKVKAGAASHLDWFSGKCLNQSTPIGPEVFPL
CCCCCCCCCCCHHHCCCEEECCCCHHHEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEH
SAIEDDLKAGTTRIRCLVNGEVRQDAPVADMIFDIPTMIAFISSRIPLNPGDIIATGTPP
HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
GVGAGTDRYLSKGDVVRVEVTGLPPMENTVA
CCCCCCHHHCCCCCEEEEEEECCCCCHHCCC
>Mature Secondary Structure 
GLMWFEKDGETRLGARSEAGITALTGQDMVAALAETPVQGAAVSDPVTALPPVTPTAKI
CCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
LCVALNYVDHAKEANQPVPETPIVFFKTFDAMIAGGAPIRAPRMITQLDYEGELALIIGK
HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHEEECCCCCEEEEEEC
RGFDIAKTDAWDHIAGVTTLNDVSARDIFKVKAGAASHLDWFSGKCLNQSTPIGPEVFPL
CCCCCCCCCCCHHHCCCEEECCCCHHHEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEH
SAIEDDLKAGTTRIRCLVNGEVRQDAPVADMIFDIPTMIAFISSRIPLNPGDIIATGTPP
HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
GVGAGTDRYLSKGDVVRVEVTGLPPMENTVA
CCCCCCHHHCCCCCEEEEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]