Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053324
Identifier: 89053324
GI number: 89053324
Start: 789602
End: 790162
Strand: Direct
Name: 89053324
Synonym: Jann_0833
Alternate gene names: NA
Gene position: 789602-790162 (Clockwise)
Preceding gene: 89053323
Following gene: 89053325
Centisome position: 18.29
GC content: 66.49
Gene sequence:
>561_bases TTGGGCGCCGCCGCCATCGCCTACGCAGAGGCGATTGCGCGGCGGCGGGCGTTCCGGCTTCCGGGCTATACGACGCTGGC GGAATGCGGGTTTGATGGGGACTACGTGTCCCCGATCCAGCTCTCGTCCGGCGCGTTGCGGGGGCCGATGCTGATCAGTA AGGACTGGCTGGACGCACCTTCTGCGCGCGCTAATCGGCAGGCTTTGTCGTCGATTGGCTATCTGCCCGAGATGCCGTTC AACCGCGTTCTTGACCGGGCGTTGGAGATCGCGGGTTTGACCCGGGCCAGCATCTACATCGCGCCCGTGTTCTGCCTGCT GCCCCCCCGCCGGTCGTTCGCATTGCCCCTCAGCGCGGCCAAGGCATCTTTTGAAGCCGTCGTGGCCCACGAGATCATGG GCCGGGTCCCAGTCGCCGCAGGTCAGGACGCGGCGCGGGTGTTGCGGGCCTGCGGCGTTGCGCATGTTGAAACGATCCAT CCCTCCGCCCGCGGCCATACCTTTGAACACCGGGCCCAATTGATCGCGGCAGCGCTGCGCGGCGTTCAAGAACAGCGTTA G
Upstream 100 bases:
>100_bases TTATGATCACCGGATCGTGGACGGCAAAGGGGCGGTGACGTTTCTGGTCCGCGTGAAAGAGGCGTTGGAGGATCCCCGAC GTTTGCTGATGGACCTGTAA
Downstream 100 bases:
>100_bases CCTGAAACACACCTCACATCCCCGTTCCCTCCCGTCCTCGTGTTTTCCCAGTGATCGCATGGCTGTGGCACGGTCTTTGC AGGACAAGGAGAACGGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGAAAIAYAEAIARRRAFRLPGYTTLAECGFDGDYVSPIQLSSGALRGPMLISKDWLDAPSARANRQALSSIGYLPEMPF NRVLDRALEIAGLTRASIYIAPVFCLLPPRRSFALPLSAAKASFEAVVAHEIMGRVPVAAGQDAARVLRACGVAHVETIH PSARGHTFEHRAQLIAAALRGVQEQR
Sequences:
>Translated_186_residues MGAAAIAYAEAIARRRAFRLPGYTTLAECGFDGDYVSPIQLSSGALRGPMLISKDWLDAPSARANRQALSSIGYLPEMPF NRVLDRALEIAGLTRASIYIAPVFCLLPPRRSFALPLSAAKASFEAVVAHEIMGRVPVAAGQDAARVLRACGVAHVETIH PSARGHTFEHRAQLIAAALRGVQEQR >Mature_185_residues GAAAIAYAEAIARRRAFRLPGYTTLAECGFDGDYVSPIQLSSGALRGPMLISKDWLDAPSARANRQALSSIGYLPEMPFN RVLDRALEIAGLTRASIYIAPVFCLLPPRRSFALPLSAAKASFEAVVAHEIMGRVPVAAGQDAARVLRACGVAHVETIHP SARGHTFEHRAQLIAAALRGVQEQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19961; Mature: 19830
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAAIAYAEAIARRRAFRLPGYTTLAECGFDGDYVSPIQLSSGALRGPMLISKDWLDAP CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCEEECCCCCCCC SARANRQALSSIGYLPEMPFNRVLDRALEIAGLTRASIYIAPVFCLLPPRRSFALPLSAA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH KASFEAVVAHEIMGRVPVAAGQDAARVLRACGVAHVETIHPSARGHTFEHRAQLIAAALR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHH GVQEQR HHHCCC >Mature Secondary Structure GAAAIAYAEAIARRRAFRLPGYTTLAECGFDGDYVSPIQLSSGALRGPMLISKDWLDAP CHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCEEECCCCCCCC SARANRQALSSIGYLPEMPFNRVLDRALEIAGLTRASIYIAPVFCLLPPRRSFALPLSAA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH KASFEAVVAHEIMGRVPVAAGQDAARVLRACGVAHVETIHPSARGHTFEHRAQLIAAALR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHH GVQEQR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA