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The map label for this gene is atpE

Identifier: 89053259

GI number: 89053259

Start: 729334

End: 729570

Strand: Direct

Name: atpE

Synonym: Jann_0768

Alternate gene names: 89053259

Gene position: 729334-729570 (Clockwise)

Preceding gene: 89053258

Following gene: 89053260

Centisome position: 16.89

GC content: 63.71

Gene sequence:

>237_bases
ATGGAAGGCGATATCGCACAAATGGGTCAATTCATCGGTGCCGGCCTGGCCGCCATCGGTTCTGGTGCCGCCGCTATCGG
TGTGGGCCACGTGGCTGGCAACTTCCTCGCCGGCGCCCTGCGCAACCCCTCTGCGGCTGCTGGCCAGACCGCAACACTCT
TCATCGGCATCGCGTTTGCCGAGGCTCTGGGCATCTTCGCCTTCCTCGTCGCCCTGCTGCTGATGTTCGCTGTCTAA

Upstream 100 bases:

>100_bases
CCCCGCTCACTAATTTCGACCCGGGCTGACCTGTCCGGCTAGAGGTAACTTCCAATCGGGCCAGAGCCCGGAAATCTAAA
GAAACGTAAGGAGATACATC

Downstream 100 bases:

>100_bases
GACTTAAGACCGCACACGATCCTTACGTTCGGCGCGCTGATCCTTCGCGACAGCGCGCCACCGTAAACCCAAGATACCCC
GCTCCGGAGGATGACCATGG

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MEGDIAQMGQFIGAGLAAIGSGAAAIGVGHVAGNFLAGALRNPSAAAGQTATLFIGIAFAEALGIFAFLVALLLMFAV

Sequences:

>Translated_78_residues
MEGDIAQMGQFIGAGLAAIGSGAAAIGVGHVAGNFLAGALRNPSAAAGQTATLFIGIAFAEALGIFAFLVALLLMFAV
>Mature_78_residues
MEGDIAQMGQFIGAGLAAIGSGAAAIGVGHVAGNFLAGALRNPSAAAGQTATLFIGIAFAEALGIFAFLVALLLMFAV

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_JANSC (Q28UC7)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508710.1
- ProteinModelPortal:   Q28UC7
- SMR:   Q28UC7
- STRING:   Q28UC7
- GeneID:   3933211
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0768
- eggNOG:   NOG116744
- HOGENOM:   HBG753983
- OMA:   FMAIGMY
- ProtClustDB:   PRK07558
- BioCyc:   JSP290400:JANN_0768-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 7565; Mature: 7565

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc5d9698)-; HASH(0xd35b34c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGDIAQMGQFIGAGLAAIGSGAAAIGVGHVAGNFLAGALRNPSAAAGQTATLFIGIAFA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EALGIFAFLVALLLMFAV
HHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MEGDIAQMGQFIGAGLAAIGSGAAAIGVGHVAGNFLAGALRNPSAAAGQTATLFIGIAFA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EALGIFAFLVALLLMFAV
HHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA