Click here to switch to the map view.

The map label for this gene is yiaD [C]

Identifier: 89053189

GI number: 89053189

Start: 671646

End: 672233

Strand: Direct

Name: yiaD [C]

Synonym: Jann_0698

Alternate gene names: 89053189

Gene position: 671646-672233 (Clockwise)

Preceding gene: 89053188

Following gene: 89053190

Centisome position: 15.55

GC content: 64.46

Gene sequence:

>588_bases
GTGATTAACGCTCTGACACGCGGTTTGGCGCGGGTATTTGCGGGCTCGCTTGGCATGACTGCTCTTGGTGTGGGGGCGTT
TGTGGTCACCGCGACACCGGCGGCAGCTCAACAGCAAATCATCATAACGGGACAGGTCCAGCCGGGTCTTTGGGTGGACC
CCGACGGGTGCCTGCACTGGGTCGCGGATGGCGGGATCGAGGGCTATATGGAAGGCCGCGTGAACCCCGAGAACGGGATG
CCGGTCTGCCTGGATGTGAACCCCTGCGGCGTCGCGAATACCGATACGATGTTCCAGTCCGGCAGCGCCCGTCTGACCGG
CTCGGGCCGTCAGTATCTGCAACAGTTCTTTGCCGGGGCAGGGGCTTATGCCTACGCCATCTATGGCCATACCGACAGCC
GCGCCTCGGACGAATACAACATGCGTCTGAGTGAGCGGCGGGCCGCTGCCGTGGCCAATGTCGCCCGCTCCGTAGGCGCG
CGGGTCGCCCGTGAAATCGGTTACGGGGAACGGCGTCCGGTCGCCCCCAACGACTCGGCTGCGAACATGCAGCGCAATCG
CCGCGTCGAAATCGTGTGCTACCGCTGA

Upstream 100 bases:

>100_bases
ATCGGCTCTGCAGGCTCGTCAGGATGGTGCTGGACGCATTTGATCGAAGCCCATGGCGCGTCTGGTCGCGCGAGGGTTCG
GAATATAGGGGGATGGACGC

Downstream 100 bases:

>100_bases
GGCGGGGGAAAGGATCCAAAATGACAGTGTTTAAACGTCCCCTGCTGATCGCCGCGCCGCTGGCCCTGATGGGCTGTGTG
GAGAGCTTTGAAGGTGCGGT

Product: OmpA/MotB

Products: NA

Alternate protein names: OmpA/MotB; OmpA/MotB Domain-Containing Protein

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MINALTRGLARVFAGSLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHWVADGGIEGYMEGRVNPENGM
PVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQFFAGAGAYAYAIYGHTDSRASDEYNMRLSERRAAAVANVARSVGA
RVAREIGYGERRPVAPNDSAANMQRNRRVEIVCYR

Sequences:

>Translated_195_residues
MINALTRGLARVFAGSLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHWVADGGIEGYMEGRVNPENGM
PVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQFFAGAGAYAYAIYGHTDSRASDEYNMRLSERRAAAVANVARSVGA
RVAREIGYGERRPVAPNDSAANMQRNRRVEIVCYR
>Mature_195_residues
MINALTRGLARVFAGSLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHWVADGGIEGYMEGRVNPENGM
PVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQFFAGAGAYAYAIYGHTDSRASDEYNMRLSERRAAAVANVARSVGA
RVAREIGYGERRPVAPNDSAANMQRNRRVEIVCYR

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20819; Mature: 20819

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINALTRGLARVFAGSLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHW
CCHHHHHHHHHHHHCCCCHHHHHHCEEEEEECCCHHCEEEEEEECCCCCCEECCCCCEEE
VADGGIEGYMEGRVNPENGMPVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQFFAGA
EECCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCEEECCHHHHHHHHHCCC
GAYAYAIYGHTDSRASDEYNMRLSERRAAAVANVARSVGARVAREIGYGERRPVAPNDSA
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
ANMQRNRRVEIVCYR
HHHHHCCEEEEEEEC
>Mature Secondary Structure
MINALTRGLARVFAGSLGMTALGVGAFVVTATPAAAQQQIIITGQVQPGLWVDPDGCLHW
CCHHHHHHHHHHHHCCCCHHHHHHCEEEEEECCCHHCEEEEEEECCCCCCEECCCCCEEE
VADGGIEGYMEGRVNPENGMPVCLDVNPCGVANTDTMFQSGSARLTGSGRQYLQQFFAGA
EECCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCEEECCHHHHHHHHHCCC
GAYAYAIYGHTDSRASDEYNMRLSERRAAAVANVARSVGARVAREIGYGERRPVAPNDSA
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
ANMQRNRRVEIVCYR
HHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA