| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658315
Identifier: 88658315
GI number: 88658315
Start: 939822
End: 941084
Strand: Reverse
Name: 88658315
Synonym: ECH_0916
Alternate gene names: NA
Gene position: 941084-939822 (Counterclockwise)
Preceding gene: 88658456
Following gene: 88658504
Centisome position: 80.01
GC content: 33.41
Gene sequence:
>1263_bases ATGTTTAGTAATATTTTTAGGGCTATTAGGGGTGGTGTTAGAGCTATACCATCTACTCCATTGAAGATATTTAATGGTGT ACGTACAGTATATGGTTTTTTTGGTGTTATACCAATACTTAGAGCATTTCCTACGTTTGGGGTTAATCAAAAAGTTAAGT GCAGAGCGCTACTACCAGCTTTACATAGAAGTCAAACATGTAAATATATACCAAGTAAATGTCATAATGTAGGATTAAAG ATTGAAGGAGATTATTTAATATATAAAGGAAAAAGATATCCAGTTACTCCGTTAACAGGGCCTGACAAAATGCCAATTTT TAATGTGCAAGGACATATGTTATATGCAATAAATACTGCTGGGCTTAGTAATTATGAGGATTTTGAATCTAAAGAAGAGG AAAATAAAGTATTAGTTGTAGCTTTTGATGGAAGTAAATGTGTTGATCCTGTAGGGAAACGTAATAATAGAGATGTCATG TTGAGTAGTGAACATGAAGTTTATCCTTATTCATTTTCTGTTTGTAAATATGAGAATAAAAAGACTAACTTACCACTTTC TTTGCTTATGTTACCCTTTAATTTAGCTGGGTTAGCAATTGGGTGTACAGGTAGAACATTTGGTGCAATATTGTTAGGTG TAGCACGATGTTGTGATAATGTGTCTGCATATATTGCTCAAAGAGTAGATAAAAAAATAATACATACAAGTTCTGGGGTT TTACCAGGTAGGTATAGACCATATGCTGCTACATTATTTATGTTTTTCTTGTCTATTGTTAGTAATAGTTTAACATGTTG TTCATCTTTTGTCAGACATTCTGCTAGTTTGTGCGAAGGTATAATAAGATTCCCTAGTGCCATCACGAATGGTATACATA ATCGTAATATGAGATGTTTACCAGTAATGGCGGGGATGTCTGCTATCAGTGATTCAGCTAGGTTATTGTGTTTAGGTATC AGGGATTCAGGTGTAAATTTTGTTAAAACAAGTTTACTATGTAAAGCTAGGTTAGGTGGAGATGAAAAATTTTTGAGAAG TCATGTAAGCGGACAATATGGTTTTATAGTAGATTCTGAGAGAGGTATAGAAGAGCCAAAACAGGAAGAACAGCAGAGTC AGAAGAAGAAAATTAGTCGTAGAGATTTGGAAGCAATAAGTAGACTTGGTGGTGAACTGAGTGAGCAAATTATATGTGGT ACGAGTGAGGATATTAATAAAGAATTAAGTAAACAAAAAAGAACATCTGCAAAAACTGTATAA
Upstream 100 bases:
>100_bases TTCTTTATGTTCTTTATATTAAATATTTTTGATATTAATTTTTTTACTATTGTATAATATAGTTAAGTAGGTGTTTTTGT AATATTAGTGTTGATAAGAT
Downstream 100 bases:
>100_bases CAATCAGATATTATCATAATAAAATTAACTGAATGATAGAATAAGGGTATTATTTATTTTCTGATAACGCTAATAGATTT GCGTATATGTGATTATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MFSNIFRAIRGGVRAIPSTPLKIFNGVRTVYGFFGVIPILRAFPTFGVNQKVKCRALLPALHRSQTCKYIPSKCHNVGLK IEGDYLIYKGKRYPVTPLTGPDKMPIFNVQGHMLYAINTAGLSNYEDFESKEEENKVLVVAFDGSKCVDPVGKRNNRDVM LSSEHEVYPYSFSVCKYENKKTNLPLSLLMLPFNLAGLAIGCTGRTFGAILLGVARCCDNVSAYIAQRVDKKIIHTSSGV LPGRYRPYAATLFMFFLSIVSNSLTCCSSFVRHSASLCEGIIRFPSAITNGIHNRNMRCLPVMAGMSAISDSARLLCLGI RDSGVNFVKTSLLCKARLGGDEKFLRSHVSGQYGFIVDSERGIEEPKQEEQQSQKKKISRRDLEAISRLGGELSEQIICG TSEDINKELSKQKRTSAKTV
Sequences:
>Translated_420_residues MFSNIFRAIRGGVRAIPSTPLKIFNGVRTVYGFFGVIPILRAFPTFGVNQKVKCRALLPALHRSQTCKYIPSKCHNVGLK IEGDYLIYKGKRYPVTPLTGPDKMPIFNVQGHMLYAINTAGLSNYEDFESKEEENKVLVVAFDGSKCVDPVGKRNNRDVM LSSEHEVYPYSFSVCKYENKKTNLPLSLLMLPFNLAGLAIGCTGRTFGAILLGVARCCDNVSAYIAQRVDKKIIHTSSGV LPGRYRPYAATLFMFFLSIVSNSLTCCSSFVRHSASLCEGIIRFPSAITNGIHNRNMRCLPVMAGMSAISDSARLLCLGI RDSGVNFVKTSLLCKARLGGDEKFLRSHVSGQYGFIVDSERGIEEPKQEEQQSQKKKISRRDLEAISRLGGELSEQIICG TSEDINKELSKQKRTSAKTV >Mature_420_residues MFSNIFRAIRGGVRAIPSTPLKIFNGVRTVYGFFGVIPILRAFPTFGVNQKVKCRALLPALHRSQTCKYIPSKCHNVGLK IEGDYLIYKGKRYPVTPLTGPDKMPIFNVQGHMLYAINTAGLSNYEDFESKEEENKVLVVAFDGSKCVDPVGKRNNRDVM LSSEHEVYPYSFSVCKYENKKTNLPLSLLMLPFNLAGLAIGCTGRTFGAILLGVARCCDNVSAYIAQRVDKKIIHTSSGV LPGRYRPYAATLFMFFLSIVSNSLTCCSSFVRHSASLCEGIIRFPSAITNGIHNRNMRCLPVMAGMSAISDSARLLCLGI RDSGVNFVKTSLLCKARLGGDEKFLRSHVSGQYGFIVDSERGIEEPKQEEQQSQKKKISRRDLEAISRLGGELSEQIICG TSEDINKELSKQKRTSAKTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46513; Mature: 46513
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNIFRAIRGGVRAIPSTPLKIFNGVRTVYGFFGVIPILRAFPTFGVNQKVKCRALLPA CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LHRSQTCKYIPSKCHNVGLKIEGDYLIYKGKRYPVTPLTGPDKMPIFNVQGHMLYAINTA HHHCCCHHHCCHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECC GLSNYEDFESKEEENKVLVVAFDGSKCVDPVGKRNNRDVMLSSEHEVYPYSFSVCKYENK CCCCCHHHHCHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCC KTNLPLSLLMLPFNLAGLAIGCTGRTFGAILLGVARCCDNVSAYIAQRVDKKIIHTSSGV CCCCCCEEEEHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPGRYRPYAATLFMFFLSIVSNSLTCCSSFVRHSASLCEGIIRFPSAITNGIHNRNMRCL CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE PVMAGMSAISDSARLLCLGIRDSGVNFVKTSLLCKARLGGDEKFLRSHVSGQYGFIVDSE HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECC RGIEEPKQEEQQSQKKKISRRDLEAISRLGGELSEQIICGTSEDINKELSKQKRTSAKTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFSNIFRAIRGGVRAIPSTPLKIFNGVRTVYGFFGVIPILRAFPTFGVNQKVKCRALLPA CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LHRSQTCKYIPSKCHNVGLKIEGDYLIYKGKRYPVTPLTGPDKMPIFNVQGHMLYAINTA HHHCCCHHHCCHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECC GLSNYEDFESKEEENKVLVVAFDGSKCVDPVGKRNNRDVMLSSEHEVYPYSFSVCKYENK CCCCCHHHHCHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCC KTNLPLSLLMLPFNLAGLAIGCTGRTFGAILLGVARCCDNVSAYIAQRVDKKIIHTSSGV CCCCCCEEEEHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPGRYRPYAATLFMFFLSIVSNSLTCCSSFVRHSASLCEGIIRFPSAITNGIHNRNMRCL CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE PVMAGMSAISDSARLLCLGIRDSGVNFVKTSLLCKARLGGDEKFLRSHVSGQYGFIVDSE HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECC RGIEEPKQEEQQSQKKKISRRDLEAISRLGGELSEQIICGTSEDINKELSKQKRTSAKTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA