Click here to switch to the map view.

The map label for this gene is 88658456

Identifier: 88658456

GI number: 88658456

Start: 941300

End: 941656

Strand: Reverse

Name: 88658456

Synonym: ECH_0917

Alternate gene names: NA

Gene position: 941656-941300 (Counterclockwise)

Preceding gene: 88658394

Following gene: 88658315

Centisome position: 80.06

GC content: 26.33

Gene sequence:

>357_bases
ATGGTTAGTCATTCAGTTTATCATTGGTTAATTCAAAGGGTTACGGCTTTTGTTTTAATTCCTCTTTCTCTGTGGTTTTT
ATTTAAGGTTCTTGGTGTTATTTCTATAATACTTAAATCTTTTCCAGAACTTCATTTGTCTATTTCAAATATAAGTAATA
CTGATCTTATTATTTTATTATGCTTTTTTATCTCTGCATTTTATCATGCGGTTCTAGGTGTACAGGTTATATTAGAAGAT
TATATACATTCTGTTGTGTTAAGAGCATCTGTATTTCTTGTTATTAAAGGAATTGTGATTTTAACTGTGTTGTTTTTAAC
ATTTATAATTTTATATAGTGTACTGTTAGGATATTAA

Upstream 100 bases:

>100_bases
TAAATCTGCGGTGAGAACTACGGGAGTGGTAGTTGTTTTTTTATGTCTAGTCTCATCTTTTATACTTTATAGTTTTTTCT
TAAGTTAATGATATAAAATT

Downstream 100 bases:

>100_bases
TTCTGTTCATTTTTTATATTTAGATGAATAAGGGTTTTGATAGATAATTTCCCTGTGTGTTGTAAGCTAAATATTTTTTA
TTAGTTTTTATATAATATTT

Product: putative succinate dehydrogenase, hydrophobic membrane anchor protein

Products: NA

Alternate protein names: Succinate Dehydrogenase Subunit D

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MVSHSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILLCFFISAFYHAVLGVQVILED
YIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLGY

Sequences:

>Translated_118_residues
MVSHSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILLCFFISAFYHAVLGVQVILED
YIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLGY
>Mature_118_residues
MVSHSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILLCFFISAFYHAVLGVQVILED
YIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLGY

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13424; Mature: 13424

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSHSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CFFISAFYHAVLGVQVILEDYIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSHSVYHWLIQRVTAFVLIPLSLWFLFKVLGVISIILKSFPELHLSISNISNTDLIILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CFFISAFYHAVLGVQVILEDYIHSVVLRASVFLVIKGIVILTVLFLTFIILYSVLLGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA