| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657779
Identifier: 88657779
GI number: 88657779
Start: 951795
End: 952613
Strand: Reverse
Name: 88657779
Synonym: ECH_0929
Alternate gene names: NA
Gene position: 952613-951795 (Counterclockwise)
Preceding gene: 88657588
Following gene: 88658412
Centisome position: 80.99
GC content: 32.23
Gene sequence:
>819_bases ATGAGATTGTATAAGTATATATATGTATGTTTTTTTCTATTGCCATTTAGCCTAATGGCATGTGTGACTGTTGTTGATAC GCCTGATGAATGTGTGAATAATTCATCTGGTATAAATCCTTTTTTCAAAACAGAGGAATATTCTAAGTGTGGTACTCTGC CTAGTCCTCCTCTGCTTAATGAATTTGATAAAGCTGTCTTAGATGTTTGTGGTGATTGGGGTAGTACTCCAGGAGTAGAG GATTTTAAAAATATATTAAATGAAGAAAAATATAAAGAATATGTTGATGAGTTATATCAAAAATTAGATCATCAAGTGTT TACTCCAAATGCGGATCTTGAGACATTTAAAAATGAGTTAGCAGAGTTGTGGTTTAATAGAGATGGATTTACTCATATAA TGTGTGGACAGCCTAAACTAGGTAGATTAGGTGGTATGCATTTCTTTGGACGTTACTTGCAGGCTCAAGAGAATAAGTGG GTTGGTAGATATTATGATGATGATTTGACTGATGAAGTTAGTGATAAAGTATTTACTATTGGAGTTATGTTTAAAAATGT TAATGGGCAATTAGTAGTTGATCCTAGAAAGGGTTATGATTTCTTACATGCTAATGAAATTATATTACATGCTACAAGTG CTTACAAGGGGTTGTCTCAAAATTCTCAATTAGCGGAACAAAGAAATAGGCATTGTCTTTATGGTAATGAAGATGTTACT TATGTATTTGTAGCTCGTAAAAATTCTATTGTTACATTTTTTGCAGATTTAACTCCAAATTGTAGAAGAGGTGAAACAGA ATGTAGCTGTATCAAATAG
Upstream 100 bases:
>100_bases TTACTATTAATAAAAATTTTAATGAATAATATGATATTTGGCATTTTTATGCTAATAAGAGATATGTTAATTTTTTTTTT GTTATGTGAGGAATAATATT
Downstream 100 bases:
>100_bases TCAGTATCAATTTATTGTGCTACTGTACGTTAATTATGTAGTAAACTGTACAGTAGCGCATTATTATTGGTTTTGTTTTT ACTGAAGAGATATTAATTGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRLYKYIYVCFFLLPFSLMACVTVVDTPDECVNNSSGINPFFKTEEYSKCGTLPSPPLLNEFDKAVLDVCGDWGSTPGVE DFKNILNEEKYKEYVDELYQKLDHQVFTPNADLETFKNELAELWFNRDGFTHIMCGQPKLGRLGGMHFFGRYLQAQENKW VGRYYDDDLTDEVSDKVFTIGVMFKNVNGQLVVDPRKGYDFLHANEIILHATSAYKGLSQNSQLAEQRNRHCLYGNEDVT YVFVARKNSIVTFFADLTPNCRRGETECSCIK
Sequences:
>Translated_272_residues MRLYKYIYVCFFLLPFSLMACVTVVDTPDECVNNSSGINPFFKTEEYSKCGTLPSPPLLNEFDKAVLDVCGDWGSTPGVE DFKNILNEEKYKEYVDELYQKLDHQVFTPNADLETFKNELAELWFNRDGFTHIMCGQPKLGRLGGMHFFGRYLQAQENKW VGRYYDDDLTDEVSDKVFTIGVMFKNVNGQLVVDPRKGYDFLHANEIILHATSAYKGLSQNSQLAEQRNRHCLYGNEDVT YVFVARKNSIVTFFADLTPNCRRGETECSCIK >Mature_272_residues MRLYKYIYVCFFLLPFSLMACVTVVDTPDECVNNSSGINPFFKTEEYSKCGTLPSPPLLNEFDKAVLDVCGDWGSTPGVE DFKNILNEEKYKEYVDELYQKLDHQVFTPNADLETFKNELAELWFNRDGFTHIMCGQPKLGRLGGMHFFGRYLQAQENKW VGRYYDDDLTDEVSDKVFTIGVMFKNVNGQLVVDPRKGYDFLHANEIILHATSAYKGLSQNSQLAEQRNRHCLYGNEDVT YVFVARKNSIVTFFADLTPNCRRGETECSCIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31280; Mature: 31280
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYKYIYVCFFLLPFSLMACVTVVDTPDECVNNSSGINPFFKTEEYSKCGTLPSPPLLN CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHH EFDKAVLDVCGDWGSTPGVEDFKNILNEEKYKEYVDELYQKLDHQVFTPNADLETFKNEL HHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH AELWFNRDGFTHIMCGQPKLGRLGGMHFFGRYLQAQENKWVGRYYDDDLTDEVSDKVFTI HHHHCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEE GVMFKNVNGQLVVDPRKGYDFLHANEIILHATSAYKGLSQNSQLAEQRNRHCLYGNEDVT EEEEECCCCEEEECCCCCCCEEECCEEEEEECHHHCCCCCCHHHHHHHCCEEEECCCCEE YVFVARKNSIVTFFADLTPNCRRGETECSCIK EEEEEECCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLYKYIYVCFFLLPFSLMACVTVVDTPDECVNNSSGINPFFKTEEYSKCGTLPSPPLLN CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHH EFDKAVLDVCGDWGSTPGVEDFKNILNEEKYKEYVDELYQKLDHQVFTPNADLETFKNEL HHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH AELWFNRDGFTHIMCGQPKLGRLGGMHFFGRYLQAQENKWVGRYYDDDLTDEVSDKVFTI HHHHCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEE GVMFKNVNGQLVVDPRKGYDFLHANEIILHATSAYKGLSQNSQLAEQRNRHCLYGNEDVT EEEEECCCCEEEECCCCCCCEEECCEEEEEECHHHCCCCCCHHHHHHHCCEEEECCCCEE YVFVARKNSIVTFFADLTPNCRRGETECSCIK EEEEEECCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA