Click here to switch to the map view.

The map label for this gene is 88607920

Identifier: 88607920

GI number: 88607920

Start: 577663

End: 578103

Strand: Reverse

Name: 88607920

Synonym: APH_0552

Alternate gene names: NA

Gene position: 578103-577663 (Counterclockwise)

Preceding gene: 88607191

Following gene: 88607360

Centisome position: 39.29

GC content: 39.91

Gene sequence:

>441_bases
ATGCTTAATATTGGCATCTCTGAAGTATTACTTATAGTTGTAGTTGGTTGCTTAGTTACTGATCCGAAGAAACTCCCAGC
CCTGCTAAAATCTGCTGGGGCGTACTATAGGAAGTTTGAAGCTATAAAGGGTGAAATACTAGATTCCTTGAAAGGCGTAT
GTGAAGAACCAGATCCAGATCTAGTTGCGGAAGATGCTGAGGTTATACGCGGCACCAAGCAGATTATAGGTGATGATGGC
ATGGTATACGAGGCTTTTGATGTCGGTGATTTAGTTAAAAACAGATGTACTGATATCAATATCTGTTTAGGCGATAGTCC
TGAGGTTTCTTGTAATGAGGAAGATAAGAGGTCTGTTGACAACTTACCTGTACGTAAATGTGCGCTGACTACGGTGAATG
ATATTGATGCTGCATCAATCAAGGAGAATGATAAAAAATAA

Upstream 100 bases:

>100_bases
TATAGGTTTCTTGAAGACATAAACTCAGCTCAGCTTGATCTTAGCAAACTTGTACTGATTATCAGGTCTCTGAGTGTATT
TACTTTAGGTAAAGACTGCG

Downstream 100 bases:

>100_bases
CCCGCATTGTAAGGCATGCCTATGTTATTTTATGTGTAATACGAAATAAGAAATGTTTTATCTATTTCTTCTACACTTGT
AAATCTTATATGAAGCAAGA

Product: putative twin-arginine translocation protein TatB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLNIGISEVLLIVVVGCLVTDPKKLPALLKSAGAYYRKFEAIKGEILDSLKGVCEEPDPDLVAEDAEVIRGTKQIIGDDG
MVYEAFDVGDLVKNRCTDINICLGDSPEVSCNEEDKRSVDNLPVRKCALTTVNDIDAASIKENDKK

Sequences:

>Translated_146_residues
MLNIGISEVLLIVVVGCLVTDPKKLPALLKSAGAYYRKFEAIKGEILDSLKGVCEEPDPDLVAEDAEVIRGTKQIIGDDG
MVYEAFDVGDLVKNRCTDINICLGDSPEVSCNEEDKRSVDNLPVRKCALTTVNDIDAASIKENDKK
>Mature_146_residues
MLNIGISEVLLIVVVGCLVTDPKKLPALLKSAGAYYRKFEAIKGEILDSLKGVCEEPDPDLVAEDAEVIRGTKQIIGDDG
MVYEAFDVGDLVKNRCTDINICLGDSPEVSCNEEDKRSVDNLPVRKCALTTVNDIDAASIKENDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15856; Mature: 15856

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIGISEVLLIVVVGCLVTDPKKLPALLKSAGAYYRKFEAIKGEILDSLKGVCEEPDPD
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVAEDAEVIRGTKQIIGDDGMVYEAFDVGDLVKNRCTDINICLGDSPEVSCNEEDKRSVD
CCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC
NLPVRKCALTTVNDIDAASIKENDKK
CCCCHHHHHCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MLNIGISEVLLIVVVGCLVTDPKKLPALLKSAGAYYRKFEAIKGEILDSLKGVCEEPDPD
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVAEDAEVIRGTKQIIGDDGMVYEAFDVGDLVKNRCTDINICLGDSPEVSCNEEDKRSVD
CCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC
NLPVRKCALTTVNDIDAASIKENDKK
CCCCHHHHHCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA