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The map label for this gene is oxaA [H]

Identifier: 88607700

GI number: 88607700

Start: 559441

End: 561147

Strand: Reverse

Name: oxaA [H]

Synonym: APH_0540

Alternate gene names: 88607700

Gene position: 561147-559441 (Counterclockwise)

Preceding gene: 88606831

Following gene: 88607155

Centisome position: 38.14

GC content: 41.07

Gene sequence:

>1707_bases
ATGTCAGAAGTTCGTAATTTGATACTGGCGGTCGTTGCATCTGTTGCAATAATGCTAGGGTGGAAATACATTTATGGAGA
GTTTTTCGCGGTGAAAACTGTTCCTGAAGGGGTTCAGGAATCGGAATCACTAATACCAGAAGTTGATGATATTGTTGATT
ATGCTTCTTATAGTGATGCGCTAAAGCAAGTCCCGCGCGTTGAGCTTAAGAACTCAAAGCTAGCTGCCTCCGTATCACTG
AGGGGTGCTTTGATAGATGATGCGTCCTTGGTAAAATACCGGGTATCGCTTGATAAAAATTCGGAAAATGTGCTTCTAAT
GTCTCCTGAAGGGACAGTTAGTGATTCTATGGTAGAGTTTGGGTGGGTTGATCCCAAACATGTACTTAAGGTTCCAGGCA
GGGATACTGTTTGGGCTCTAGAAGATGGTAGCGATGAGCAGAATTTTACAATCCGTTGGGATAATGGGGAAGGGTTAATT
TTTCGATTGAAGTTCTCCGTGGATCAAGACTATATGCTCACGGTGGCTCAAGAAGTTATTAATAATACTGATGTTAACGT
GCACCTTGCACATTATGGTCGGATTAATAGAGCGCATTCTAAGAGTAGTAAATCTTTCTGGATCTCGCACGAAGGTGCCA
TTGGTAGTTTTGGCCATGGGCTTAAAGAGTGGACATATAAAAATTTAGAGGAAGCTGGAAGTATACGGCTCAGCGGTGTA
ACTAGAGAAGATGGCGGACGCAGCTGGATTGGGTTTGCAGATAAGTATTGGTTTACAGCATTAATACCATCAGCATCTGA
ACAAGGAAAGCTGGCCTTCCGTACGCAGCGCGTTTACAGAGAGGGAGCAAGTCGCTTTCAGGTAGATTACAGTAAATCGC
ACGGTACGATAGGAGCGCATGATAAGGTAGAGGCGGTAACGCATCTATTTATGGGAGCAAAAGAGTTAGAGCTCTTGGAT
CAATATAAGGATACGCTAAATATACCAATGTTCGATAAGGCAGTAGACTTTGGCATGTTATATTTTATTACAAAGCCTGT
ATTTTTACTGTTGCAGTACTTTCATAAGCTGCTAGGAAATTTTGGTTTAGCGATCGTAATGTTAACGGTAGCTATCAAGT
TAGTAGCCTTTCCTCTATCGATGAGGTCATACGTTTCAATGTTTAAGCTCAAGAGGCTACAGCCAGAGGTTTTAAGAATA
AAGGAACTGTATAAAACCGATGACCTTAGAATTAGTAAGGAGATAGCTTCTTTATTTAAGAAGCATAAGGTTAGTCCTCT
CTCTGGGTTTCTTCCGGTATTGATTCAGATTCCAATATTCTTCGCATTGTACAAGGTGCTATTTGTTACTATCGAGATGC
GTCATGCTCCTCTATTTGGTTGGATAAGGGATCTTTCTAGTCAAGATACAGCAAACTTCTTAAATCTATTTGGATTAATT
CCTTTGGAGCCACCGTTCTGTATAGGTGTTTTGCCTGTTGTATTGGGTCTTACAATGGTATTGCAGCAAAAAGTAATGCA
AAAAGATCAGGCTACGCCGGATCGATATGGGGTCATGAAATTCTTGCCATATATCTTTGTGTTTGTATTTTCCTCTTTTC
CTTCGGGACTTGTGCTATACTGGATATGTAGCAACGTTATAACCATTCTGCAGCAAATCGTAATCAGGTACTTTGTCTGT
AGAAAAGAGCTAGGTGCAAATGGTTAG

Upstream 100 bases:

>100_bases
ATATCCGTATTGCGTTGCAATGCTTTATATGCTAGCTTAGCTGATCCGGTGGCATGCAGTTCTGTGTGCTCTGAAGTCAC
TTACATGGCGTTTTGTGTAT

Downstream 100 bases:

>100_bases
TGTGTAGTCGTGATGGGAAGTGTTATGGATGCTAAATTGAGTGCTTTGATTGTTGTTGGGTCTTTTCATACTGAGGTTTG
TGGACAGCTTGTAAAGGGGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASYSDALKQVPRVELKNSKLAASVSL
RGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDSMVEFGWVDPKHVLKVPGRDTVWALEDGSDEQNFTIRWDNGEGLI
FRLKFSVDQDYMLTVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHGLKEWTYKNLEEAGSIRLSGV
TREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSKSHGTIGAHDKVEAVTHLFMGAKELELLD
QYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRI
KELYKTDDLRISKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTANFLNLFGLI
PLEPPFCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFVFSSFPSGLVLYWICSNVITILQQIVIRYFVC
RKELGANG

Sequences:

>Translated_568_residues
MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASYSDALKQVPRVELKNSKLAASVSL
RGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDSMVEFGWVDPKHVLKVPGRDTVWALEDGSDEQNFTIRWDNGEGLI
FRLKFSVDQDYMLTVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHGLKEWTYKNLEEAGSIRLSGV
TREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSKSHGTIGAHDKVEAVTHLFMGAKELELLD
QYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRI
KELYKTDDLRISKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTANFLNLFGLI
PLEPPFCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFVFSSFPSGLVLYWICSNVITILQQIVIRYFVC
RKELGANG
>Mature_567_residues
SEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASYSDALKQVPRVELKNSKLAASVSLR
GALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDSMVEFGWVDPKHVLKVPGRDTVWALEDGSDEQNFTIRWDNGEGLIF
RLKFSVDQDYMLTVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHGLKEWTYKNLEEAGSIRLSGVT
REDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSKSHGTIGAHDKVEAVTHLFMGAKELELLDQ
YKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIK
ELYKTDDLRISKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTANFLNLFGLIP
LEPPFCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFVFSSFPSGLVLYWICSNVITILQQIVIRYFVCR
KELGANG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=504, Percent_Identity=28.7698412698413, Blast_Score=201, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 64278; Mature: 64146

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASYSDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHH
LKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDSMVEF
HHHCCCCEECCCCEEEEEEECCEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHH
GWVDPKHVLKVPGRDTVWALEDGSDEQNFTIRWDNGEGLIFRLKFSVDQDYMLTVAQEVI
CCCCHHHHEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHH
NNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHGLKEWTYKNLEEAGSIRLSGV
CCCCCEEEEEECCCCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHHCHHHCCCEEEEEE
TREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSKSHGTIGAH
EECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCC
DKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGN
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRISKEIASLFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
KHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTANFLNLFGLI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC
PLEPPFCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFVFSSFPSGLVLY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
WICSNVITILQQIVIRYFVCRKELGANG
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASYSDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHH
LKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDSMVEF
HHHCCCCEECCCCEEEEEEECCEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHH
GWVDPKHVLKVPGRDTVWALEDGSDEQNFTIRWDNGEGLIFRLKFSVDQDYMLTVAQEVI
CCCCHHHHEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHH
NNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHGLKEWTYKNLEEAGSIRLSGV
CCCCCEEEEEECCCCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHHCHHHCCCEEEEEE
TREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSKSHGTIGAH
EECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCC
DKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGN
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRISKEIASLFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
KHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTANFLNLFGLI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC
PLEPPFCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFVFSSFPSGLVLY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
WICSNVITILQQIVIRYFVCRKELGANG
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA