| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is pssA [H]
Identifier: 88606831
GI number: 88606831
Start: 563130
End: 563924
Strand: Reverse
Name: pssA [H]
Synonym: APH_0543
Alternate gene names: 88606831
Gene position: 563924-563130 (Counterclockwise)
Preceding gene: 88607208
Following gene: 88607700
Centisome position: 38.33
GC content: 41.38
Gene sequence:
>795_bases GTGAAGCTATTCCCCAGTGTGGTCACAATGTTGGGGTTGTGCGCTGGGCTGACTTCTATAAAGTACACTTTCGCCGGAAA TTGGGAACTAGCAGCCATATTAATAATTGTGGCTGCGTTTATGGACGGAATAGATGGCAGAATAGCTCGTTTGCTTAATT CTGCCACTGGTTTCGGTGCTCAGTTAGATTCTTTAGCGGATTTTTTGAATTTCGGCGTTGCTCCGGCATTTTTGCTATAT TTTTGGCTGCTGCGTGACATGAAAGTCATCGGATGGATGCTGGTGATGATTTTCGTAGTGTGTATGTCTATAAGGCTCGC CAGGTTTAATGTTTCCTTGAACAAAGATAAAGAGAAGGATGATTGGAGAAAGTACTTCTTTGTAGGCGTGCCCGCGCCTA TAGGTGCTGGTCTTTCGCTTGTGCCTGTAATGCTTACTTTTAGTGATATTAATATTGCTGTGCTTGATGATGCATTGCAG AACAAGAATATTATCGCGATCTACTTTGTGTTCGTTGCATTTTTATCTGTGAGTAATATACCCACAGCTTCTGCTAAGTA TCATAGTATACCTAAGAGGCTGTCTTACCTTTTTATTACGCTTTTGGCTGTGCTAATGGTGCTGGCTATAACCAATCCTT GGATTACTTTTCCGATTATGGGTTTTACGTATCTTATGTCTATTCCCATCTTTGGGGTGTACTATATGTATGTTGATTCA AAGCGAAGTAATATGGAAGAGGAAGACGCGGAGGCTTTGCTATTTGAAAATGATGAAGATGACGACAACGTATAG
Upstream 100 bases:
>100_bases GAATTCGTGGTAACACTCCGATAGGTTCTATTTATGGTTGTGCTGTTTCATGGGAGAAAGTGATATCAAGGAAAGAAGCG GTGATGGATATCTTCCTATA
Downstream 100 bases:
>100_bases CAGCCCGTAGTTAAGTAAGCCTGTATTTTCCTACATTTAATATGCTTTCGTTGATGGTCTGGTAACATGCACCTATACAG ATTTTGAAATTGCTGAAATT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKLFPSVVTMLGLCAGLTSIKYTFAGNWELAAILIIVAAFMDGIDGRIARLLNSATGFGAQLDSLADFLNFGVAPAFLLY FWLLRDMKVIGWMLVMIFVVCMSIRLARFNVSLNKDKEKDDWRKYFFVGVPAPIGAGLSLVPVMLTFSDINIAVLDDALQ NKNIIAIYFVFVAFLSVSNIPTASAKYHSIPKRLSYLFITLLAVLMVLAITNPWITFPIMGFTYLMSIPIFGVYYMYVDS KRSNMEEEDAEALLFENDEDDDNV
Sequences:
>Translated_264_residues MKLFPSVVTMLGLCAGLTSIKYTFAGNWELAAILIIVAAFMDGIDGRIARLLNSATGFGAQLDSLADFLNFGVAPAFLLY FWLLRDMKVIGWMLVMIFVVCMSIRLARFNVSLNKDKEKDDWRKYFFVGVPAPIGAGLSLVPVMLTFSDINIAVLDDALQ NKNIIAIYFVFVAFLSVSNIPTASAKYHSIPKRLSYLFITLLAVLMVLAITNPWITFPIMGFTYLMSIPIFGVYYMYVDS KRSNMEEEDAEALLFENDEDDDNV >Mature_264_residues MKLFPSVVTMLGLCAGLTSIKYTFAGNWELAAILIIVAAFMDGIDGRIARLLNSATGFGAQLDSLADFLNFGVAPAFLLY FWLLRDMKVIGWMLVMIFVVCMSIRLARFNVSLNKDKEKDDWRKYFFVGVPAPIGAGLSLVPVMLTFSDINIAVLDDALQ NKNIIAIYFVFVAFLSVSNIPTASAKYHSIPKRLSYLFITLLAVLMVLAITNPWITFPIMGFTYLMSIPIFGVYYMYVDS KRSNMEEEDAEALLFENDEDDDNV
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=181, Percent_Identity=33.7016574585635, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29578; Mature: 29578
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFPSVVTMLGLCAGLTSIKYTFAGNWELAAILIIVAAFMDGIDGRIARLLNSATGFGA CCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QLDSLADFLNFGVAPAFLLYFWLLRDMKVIGWMLVMIFVVCMSIRLARFNVSLNKDKEKD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH DWRKYFFVGVPAPIGAGLSLVPVMLTFSDINIAVLDDALQNKNIIAIYFVFVAFLSVSNI HHHEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHCCC PTASAKYHSIPKRLSYLFITLLAVLMVLAITNPWITFPIMGFTYLMSIPIFGVYYMYVDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEC KRSNMEEEDAEALLFENDEDDDNV HHCCCCHHHHHEEEECCCCCCCCC >Mature Secondary Structure MKLFPSVVTMLGLCAGLTSIKYTFAGNWELAAILIIVAAFMDGIDGRIARLLNSATGFGA CCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QLDSLADFLNFGVAPAFLLYFWLLRDMKVIGWMLVMIFVVCMSIRLARFNVSLNKDKEKD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH DWRKYFFVGVPAPIGAGLSLVPVMLTFSDINIAVLDDALQNKNIIAIYFVFVAFLSVSNI HHHEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHCCC PTASAKYHSIPKRLSYLFITLLAVLMVLAITNPWITFPIMGFTYLMSIPIFGVYYMYVDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEC KRSNMEEEDAEALLFENDEDDDNV HHCCCCHHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]