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The map label for this gene is yfgL [H]

Identifier: 88607659

GI number: 88607659

Start: 404781

End: 406004

Strand: Direct

Name: yfgL [H]

Synonym: APH_0392

Alternate gene names: 88607659

Gene position: 404781-406004 (Clockwise)

Preceding gene: 88607190

Following gene: 88607350

Centisome position: 27.51

GC content: 43.46

Gene sequence:

>1224_bases
TTGCACGATTATGAACCGTGTTTTTTACGTGTTGTAGTTACTATGCGTTTGCTAGCGGCTGTATTTGTTACTTTGGTTGT
TGTATGGCAGAGTACTGTGGTATTTGCAAGTACTTCTGTATTAACGGTTATTTCTGAGAATAGCCGAGGTTTATTCGGGC
GTTCTTCAGGATCTTCAGATGTCGATGGGACATTCTCTAAGGTAAAAACGATTAGGGGTATCTCTACCAGCTTAACTATT
GTTCCAGGTGATGTTTCTGATGTGATTGTAACTCTGGACGATCAGGGTAGGCTCACAGCATTGAATAGCGGTGATACTAG
TAAGGTATTATGGTATGTAGCACTAGCTGGGGGGAGGCGTTCTGTATATTCCTCGAGTTTGATACATTCTAGAGGAGTTA
TTCTGTGTGCGATTGATAACGTGCTGTACGGGTTAGATCCTAGTACGGGGCAGGTGAAGTGGAGTAGTACTCTTCGAAAT
TTTATTAGTGGCAATCTAGTGCTGTTGAATGAAGGGCAGTCTGTGGCTTTTATGACAATAGATGGGTATCTATGTGTTTT
TGATGTCGAAACAGGGGGGCTGTTATGGCATCGGGAAGAAAGCTCGGTACAGGTGCGCGTAAAGAGTGATTTATCGGTGG
CATATTCCTCAGGTAAACACTATGTTATTGTAGTTTTACCAGATGGTAGGGTGTTATGCTTAGATTCATACAGTGGAGAT
AAGATGTGGGAGAGTGAACTCAGGCGCAGGAGCATGGGTTCAATAGGTAGTATAGAGATCACACCGGTAGTTGCAGGTTC
GGAGGTTTTTGTAGTAGATGATTCCGGTGCTTTATCAAGTATAGATTTGGAAACGGGGAAAATTACGTGGTCTGAGGATC
TTGGTGTTCTCAGTCTCTCAAAAGAGGATGAGGAGACGCTTTTCGTAGTGACAGATACTGGTGAGTTGCTTGCATATGAT
GTAGATAGCAAGGTAAGACTTTGGAAATTGTCTCTAGGTAAGTTTGGTAAGAAGAAATGCTTGCGGTGGAGGGCGCCCGT
TATGGTCAGCGGGAAGTTGTGGCTCTTGAGTATGGAAGGTTATCTTGTAGGTGTTAATGCCTTTTCAGGAGTAATAGAGG
AGTCCTATATGATCTCTGGGGCGCAAAGCCTGCGTTATCCTATTAAGGCTGATGCTTCGATATATGTCGCTGCTGGTAAG
ATGGGATTTGTGATTGTTTCATAG

Upstream 100 bases:

>100_bases
CCTCTAAGTGCAGTACCAATGCCTCTAATGCTTATATAGGGAGCAGTGAACTTTTTAACTGGATTTATGGCGTAAATAAT
AGGTTGATTTTTTCGGGTAG

Downstream 100 bases:

>100_bases
GTGTTTTATGGGTAGCAGTAACTACGATGTTGCCGTAATAGGTGCAGGTCCTGGGGGGTATAAATGCGCTATAAAGGCTG
CCAAATTGGGATTGAGTGTT

Product: PQQ repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MHDYEPCFLRVVVTMRLLAAVFVTLVVVWQSTVVFASTSVLTVISENSRGLFGRSSGSSDVDGTFSKVKTIRGISTSLTI
VPGDVSDVIVTLDDQGRLTALNSGDTSKVLWYVALAGGRRSVYSSSLIHSRGVILCAIDNVLYGLDPSTGQVKWSSTLRN
FISGNLVLLNEGQSVAFMTIDGYLCVFDVETGGLLWHREESSVQVRVKSDLSVAYSSGKHYVIVVLPDGRVLCLDSYSGD
KMWESELRRRSMGSIGSIEITPVVAGSEVFVVDDSGALSSIDLETGKITWSEDLGVLSLSKEDEETLFVVTDTGELLAYD
VDSKVRLWKLSLGKFGKKKCLRWRAPVMVSGKLWLLSMEGYLVGVNAFSGVIEESYMISGAQSLRYPIKADASIYVAAGK
MGFVIVS

Sequences:

>Translated_407_residues
MHDYEPCFLRVVVTMRLLAAVFVTLVVVWQSTVVFASTSVLTVISENSRGLFGRSSGSSDVDGTFSKVKTIRGISTSLTI
VPGDVSDVIVTLDDQGRLTALNSGDTSKVLWYVALAGGRRSVYSSSLIHSRGVILCAIDNVLYGLDPSTGQVKWSSTLRN
FISGNLVLLNEGQSVAFMTIDGYLCVFDVETGGLLWHREESSVQVRVKSDLSVAYSSGKHYVIVVLPDGRVLCLDSYSGD
KMWESELRRRSMGSIGSIEITPVVAGSEVFVVDDSGALSSIDLETGKITWSEDLGVLSLSKEDEETLFVVTDTGELLAYD
VDSKVRLWKLSLGKFGKKKCLRWRAPVMVSGKLWLLSMEGYLVGVNAFSGVIEESYMISGAQSLRYPIKADASIYVAAGK
MGFVIVS
>Mature_407_residues
MHDYEPCFLRVVVTMRLLAAVFVTLVVVWQSTVVFASTSVLTVISENSRGLFGRSSGSSDVDGTFSKVKTIRGISTSLTI
VPGDVSDVIVTLDDQGRLTALNSGDTSKVLWYVALAGGRRSVYSSSLIHSRGVILCAIDNVLYGLDPSTGQVKWSSTLRN
FISGNLVLLNEGQSVAFMTIDGYLCVFDVETGGLLWHREESSVQVRVKSDLSVAYSSGKHYVIVVLPDGRVLCLDSYSGD
KMWESELRRRSMGSIGSIEITPVVAGSEVFVVDDSGALSSIDLETGKITWSEDLGVLSLSKEDEETLFVVTDTGELLAYD
VDSKVRLWKLSLGKFGKKKCLRWRAPVMVSGKLWLLSMEGYLVGVNAFSGVIEESYMISGAQSLRYPIKADASIYVAAGK
MGFVIVS

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=340, Percent_Identity=24.7058823529412, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 44192; Mature: 44192

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDYEPCFLRVVVTMRLLAAVFVTLVVVWQSTVVFASTSVLTVISENSRGLFGRSSGSSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEEECCCCCEEECCCCCCC
VDGTFSKVKTIRGISTSLTIVPGDVSDVIVTLDDQGRLTALNSGDTSKVLWYVALAGGRR
CCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCC
SVYSSSLIHSRGVILCAIDNVLYGLDPSTGQVKWSSTLRNFISGNLVLLNEGQSVAFMTI
HHHHHHHHHCCCEEEEEECCEEECCCCCCCEEEHHHHHHHHHCCCEEEEECCCEEEEEEE
DGYLCVFDVETGGLLWHREESSVQVRVKSDLSVAYSSGKHYVIVVLPDGRVLCLDSYSGD
CCEEEEEEECCCCEEEEECCCCEEEEEECCCEEEEECCCEEEEEEECCCCEEEEECCCCC
KMWESELRRRSMGSIGSIEITPVVAGSEVFVVDDSGALSSIDLETGKITWSEDLGVLSLS
HHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCEEEECCCCCEEEEC
KEDEETLFVVTDTGELLAYDVDSKVRLWKLSLGKFGKKKCLRWRAPVMVSGKLWLLSMEG
CCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCHHHHEECCCEEEECEEEEEEECC
YLVGVNAFSGVIEESYMISGAQSLRYPIKADASIYVAAGKMGFVIVS
EEEEEHHHHHHHHHHEEECCHHHCCCCEECCCEEEEEECCEEEEEEC
>Mature Secondary Structure
MHDYEPCFLRVVVTMRLLAAVFVTLVVVWQSTVVFASTSVLTVISENSRGLFGRSSGSSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEEECCCCCEEECCCCCCC
VDGTFSKVKTIRGISTSLTIVPGDVSDVIVTLDDQGRLTALNSGDTSKVLWYVALAGGRR
CCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCC
SVYSSSLIHSRGVILCAIDNVLYGLDPSTGQVKWSSTLRNFISGNLVLLNEGQSVAFMTI
HHHHHHHHHCCCEEEEEECCEEECCCCCCCEEEHHHHHHHHHCCCEEEEECCCEEEEEEE
DGYLCVFDVETGGLLWHREESSVQVRVKSDLSVAYSSGKHYVIVVLPDGRVLCLDSYSGD
CCEEEEEEECCCCEEEEECCCCEEEEEECCCEEEEECCCEEEEEEECCCCEEEEECCCCC
KMWESELRRRSMGSIGSIEITPVVAGSEVFVVDDSGALSSIDLETGKITWSEDLGVLSLS
HHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCEEEECCCCCEEEEC
KEDEETLFVVTDTGELLAYDVDSKVRLWKLSLGKFGKKKCLRWRAPVMVSGKLWLLSMEG
CCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCHHHHEECCCEEEECEEEEEEECC
YLVGVNAFSGVIEESYMISGAQSLRYPIKADASIYVAAGKMGFVIVS
EEEEEHHHHHHHHHHEEECCHHHCCCCEECCCEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]