| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607607
Identifier: 88607607
GI number: 88607607
Start: 479627
End: 481105
Strand: Direct
Name: 88607607
Synonym: APH_0453
Alternate gene names: NA
Gene position: 479627-481105 (Clockwise)
Preceding gene: 88607840
Following gene: 88607661
Centisome position: 32.6
GC content: 44.49
Gene sequence:
>1479_bases ATGCATACGCCACGTACATTCACAAGTGCGCTTGTCTATGGCTATACTTACAGTGGAACCGCTTCTACTGTGTATAAAGA CACTGTATGTGCTGCAATAAGAATAGGGGCCATTTCACAAGAGGATTTTCTTGGGATCCTGCGTAGATGTGTGCTCGAAT TACGCGAGACGTTTGAACTTGTCGCCCAAGCAGATCCAGAGGTTGCTGATCTTGTAGCGAGGATGGCATACATCGAATCT CTAGTGGATGATGAGAGGGCAAGAGGCAGTGAGCCACAAGAAGATGTAGTGCGGCAATTGAATCTCATGATCCTGGTGAA TCACCTCTATGATGCGCTGTATGCATGTGTTGCAGCAACTTGCAATCATGAGATGTTTAGAAACCCTGACTTTGTTGGGC GTGGAATGCAGCTACAAATGGCTAAAGGATGCGCTATCCTGGTGAATGTTGTTTCCATGGTACACTGCTTTGCTAATGAT GCTGATCCTCAGGCTCACACTGAAGATGTAGCGTGTGATAAAGAAGTAGTATCTAATATCAATCTGTCTTTAAATGCGTA TCTCAATACAAAATGTATAGCTATAGTTAGATGCTTAAATCCTGCGCTGAGTGCTGAAAATCAAGAATATGGAAGGAGCG CTTTTCGTGTAGTTCGACACAATGCAGAGCTTTTGCGGAAAGTTGCTGAGTTGGTTGATCATAGCATACCGAATTGTTTC CGTCATTATACTCAGAGTTGTTTTGGCACTTTAAGTGAGGTGATTGACTCATGCTCATCTGAATGTGAAGAGATTTTGCA AGGCGACGAAATAGCATGCATGAGGATACTGTTGTCTTCTGAAGCGAGTGAAGCTTGTTTTGATGATCTTTCGCGGTATG TAAACAGATCAGAAGTTGGCAGTGCCGTTAAACATCGTAGCAGTTCATGTACATATGCTTTGATAAGGGCTATTGGTTGT TTGCTATTGATATATAGAGAATATGCTGCTTCAGAAAGCGCAAACCATCCTTTTGCTTGCAGCATTAAGCGCTGTATTGA AATTCTACGTGACAGCGTTTACCCGAAAGTGTCCTGCCATGAATGGGGAGAAGAGAAAGGATCTAATGTAGCATATGAGA CACACCTACGCATGTGTCGAGCCGCTGATGAGCTGCAAGCCGTTGCGCCAGAGCTGCTACTAAGTCCTCATATATCTGGT GAATTGCACCAAAAGGCATTGTGTTGCCTTAAAGAAATGTCATGTGCTTGGAAGTCAGCTAACAGTGAACATTTCAGTGT TCCTGAAGAGGGAGAATCTTCGTCTCGTCATCCCTCGATATCGCTCTCAACAGAGCAAGCAACATCAGTCTCAACTTCAG CTCCAGCATCAGTATGTGCTAGTTCCGTACTGGAAGAGGCACGCATCAGCTCCCCTAGATCATTACGAACTCCTAGTTGG GATATCGAGCCACCTGTTAAACGAGCGCGAAGCGCATAG
Upstream 100 bases:
>100_bases TAGTGGCTTATATCACTATTTATTAAAAAATCAATAATTGAACTGTACAGCGCTGATATGATACAATTGTGGGGTGTGAT ACCTTGCAGAGTTAAATAAG
Downstream 100 bases:
>100_bases TCTTTCGCCAATATCTAGGTATTTAGCGTTCTATATGCAGATATGGCGCTGAAGACATTGGGTTAGTCATGTCTTGTAAT TTGTAGCAGTGGAATGTCTT
Product: HGE-14 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MHTPRTFTSALVYGYTYSGTASTVYKDTVCAAIRIGAISQEDFLGILRRCVLELRETFELVAQADPEVADLVARMAYIES LVDDERARGSEPQEDVVRQLNLMILVNHLYDALYACVAATCNHEMFRNPDFVGRGMQLQMAKGCAILVNVVSMVHCFAND ADPQAHTEDVACDKEVVSNINLSLNAYLNTKCIAIVRCLNPALSAENQEYGRSAFRVVRHNAELLRKVAELVDHSIPNCF RHYTQSCFGTLSEVIDSCSSECEEILQGDEIACMRILLSSEASEACFDDLSRYVNRSEVGSAVKHRSSSCTYALIRAIGC LLLIYREYAASESANHPFACSIKRCIEILRDSVYPKVSCHEWGEEKGSNVAYETHLRMCRAADELQAVAPELLLSPHISG ELHQKALCCLKEMSCAWKSANSEHFSVPEEGESSSRHPSISLSTEQATSVSTSAPASVCASSVLEEARISSPRSLRTPSW DIEPPVKRARSA
Sequences:
>Translated_492_residues MHTPRTFTSALVYGYTYSGTASTVYKDTVCAAIRIGAISQEDFLGILRRCVLELRETFELVAQADPEVADLVARMAYIES LVDDERARGSEPQEDVVRQLNLMILVNHLYDALYACVAATCNHEMFRNPDFVGRGMQLQMAKGCAILVNVVSMVHCFAND ADPQAHTEDVACDKEVVSNINLSLNAYLNTKCIAIVRCLNPALSAENQEYGRSAFRVVRHNAELLRKVAELVDHSIPNCF RHYTQSCFGTLSEVIDSCSSECEEILQGDEIACMRILLSSEASEACFDDLSRYVNRSEVGSAVKHRSSSCTYALIRAIGC LLLIYREYAASESANHPFACSIKRCIEILRDSVYPKVSCHEWGEEKGSNVAYETHLRMCRAADELQAVAPELLLSPHISG ELHQKALCCLKEMSCAWKSANSEHFSVPEEGESSSRHPSISLSTEQATSVSTSAPASVCASSVLEEARISSPRSLRTPSW DIEPPVKRARSA >Mature_492_residues MHTPRTFTSALVYGYTYSGTASTVYKDTVCAAIRIGAISQEDFLGILRRCVLELRETFELVAQADPEVADLVARMAYIES LVDDERARGSEPQEDVVRQLNLMILVNHLYDALYACVAATCNHEMFRNPDFVGRGMQLQMAKGCAILVNVVSMVHCFAND ADPQAHTEDVACDKEVVSNINLSLNAYLNTKCIAIVRCLNPALSAENQEYGRSAFRVVRHNAELLRKVAELVDHSIPNCF RHYTQSCFGTLSEVIDSCSSECEEILQGDEIACMRILLSSEASEACFDDLSRYVNRSEVGSAVKHRSSSCTYALIRAIGC LLLIYREYAASESANHPFACSIKRCIEILRDSVYPKVSCHEWGEEKGSNVAYETHLRMCRAADELQAVAPELLLSPHISG ELHQKALCCLKEMSCAWKSANSEHFSVPEEGESSSRHPSISLSTEQATSVSTSAPASVCASSVLEEARISSPRSLRTPSW DIEPPVKRARSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54318; Mature: 54318
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTPRTFTSALVYGYTYSGTASTVYKDTVCAAIRIGAISQEDFLGILRRCVLELRETFEL CCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VAQADPEVADLVARMAYIESLVDDERARGSEPQEDVVRQLNLMILVNHLYDALYACVAAT HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CNHEMFRNPDFVGRGMQLQMAKGCAILVNVVSMVHCFANDADPQAHTEDVACDKEVVSNI HCHHHHCCCCHHCCCCEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC NLSLNAYLNTKCIAIVRCLNPALSAENQEYGRSAFRVVRHNAELLRKVAELVDHSIPNCF CCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RHYTQSCFGTLSEVIDSCSSECEEILQGDEIACMRILLSSEASEACFDDLSRYVNRSEVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHH SAVKHRSSSCTYALIRAIGCLLLIYREYAASESANHPFACSIKRCIEILRDSVYPKVSCH HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH EWGEEKGSNVAYETHLRMCRAADELQAVAPELLLSPHISGELHQKALCCLKEMSCAWKSA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC NSEHFSVPEEGESSSRHPSISLSTEQATSVSTSAPASVCASSVLEEARISSPRSLRTPSW CCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DIEPPVKRARSA CCCCCHHHCCCC >Mature Secondary Structure MHTPRTFTSALVYGYTYSGTASTVYKDTVCAAIRIGAISQEDFLGILRRCVLELRETFEL CCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VAQADPEVADLVARMAYIESLVDDERARGSEPQEDVVRQLNLMILVNHLYDALYACVAAT HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CNHEMFRNPDFVGRGMQLQMAKGCAILVNVVSMVHCFANDADPQAHTEDVACDKEVVSNI HCHHHHCCCCHHCCCCEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC NLSLNAYLNTKCIAIVRCLNPALSAENQEYGRSAFRVVRHNAELLRKVAELVDHSIPNCF CCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RHYTQSCFGTLSEVIDSCSSECEEILQGDEIACMRILLSSEASEACFDDLSRYVNRSEVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHH SAVKHRSSSCTYALIRAIGCLLLIYREYAASESANHPFACSIKRCIEILRDSVYPKVSCH HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH EWGEEKGSNVAYETHLRMCRAADELQAVAPELLLSPHISGELHQKALCCLKEMSCAWKSA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC NSEHFSVPEEGESSSRHPSISLSTEQATSVSTSAPASVCASSVLEEARISSPRSLRTPSW CCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DIEPPVKRARSA CCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA