| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88607840
Identifier: 88607840
GI number: 88607840
Start: 477026
End: 478408
Strand: Direct
Name: 88607840
Synonym: APH_0452
Alternate gene names: NA
Gene position: 477026-478408 (Clockwise)
Preceding gene: 88607727
Following gene: 88607607
Centisome position: 32.42
GC content: 39.12
Gene sequence:
>1383_bases ATGGACATTCTCAATGGTGATAGAACTTCTTCGGATTACAGAAATACTGTGTGTTACTATATTAGAGCGGGGAAAGTTTC GCTATGTGATTTGATGGAGGTTCTCAGTGACAGCATTGGGGAGTTGCAGAAGGTATTTGTTTGTGCATGTTCTAAAGATG AGAAGTTCTCTCTCCTGGCAGATAAGATGTCCTTTGTGCAATCAATAGTTGCACGAAAAGACGGGATAGTTATCTATTCA ATAGGCGGGATATTGGCACAAGATCATAGCGTCTTAGATTTTCTATATGACACATTGTTTTCATGTATAACGGCTACTTG TAATAAGGACCTGAGTGAATTTACGAGCCCGTTACTTTTTCGCGATAGTATACGTGTACAAATGCTCGAAGCATGTGCGC TCCTGGTAAATATCATCTCAATATATCACTGCTTTGTACAAACCTATGCTCCTAGACATACTATTGTGCCCAGAGATAAT GATGATGAAACTGTTTTGCATGTACAGCTTGCATTAAGTGCATATCTAAATGCGCTACATGCTGCGAAAAGCTATTACTA CCTAATGTCTGTGGTGCCTAAAGGGGAGAAAATGGCGCTTTCACGGTTTATTTTGCATAATGCAGAATTAGCGCTCAAGG TGAGTGAGCTAGTTGATGTAGACGTACCTTTTTTTTACAGGCCCCGGATTGGACACTTGCTATATACTATGATGGACACT ATTGAGAATTCATATTCCATATCGAGGCCTGATGCACTTACTGATGAGGAAAAAGTTTTACACGTTTCCCTCGCAACTGA AGCACGCATTGTATTTAATTTCTACATGAATCGTTATGTTACTGAGAGTGAAGCTGCATGTTCAATACAAAGTAAGACAA GCCCGGTTGTGAAGGCTTTGATCGGGGCTGTGGGTTGTATGTTCTTGTTATGTAGGGAATGCTTATTACAGGCAAAATTA GATAATTCTCTTACCCGTGACATTAAGAGTTGTATTACAATTTTACGCGATGAGGTTTATCCAATAGTATTTTCCTATGA GAATGAGCTTGTGAGTACTTCTGCTCTGGCTTGTGTTGTCCCCATACATTTATCTCACGCTACTAAAAAGCTGAAAGCTA TTTCACTAGATTTATTATTAAACTCAGCGGAGTCGGTTGCTTTATACAATATAGCATCTCTATACCTTGAAAAAGCATCC TCCGCGTGGAATATAGAGGCTATAAAATATAGAGCGATGCTCCCACTATACTTATTTCCAAATAAGAAAAAACAAACAAC TAACACTACTACGTTTACCGGTGCTCCACTAGGAACTCCTCAAATTACTTCTTCGCAGCAGGTGTTTTATGCTACAGATT TGGATCTTACAAGAAAGATATAG
Upstream 100 bases:
>100_bases AAAAATTAGTAGCATTTGTGGTACACCACTTCTATTCTAAGATGAATATTATTAAATATTTAATAATATATGAGTATGTG GGTGAGTGATGTAGGCGATT
Downstream 100 bases:
>100_bases CAGAGCTGCTAAAACGTCTTTTTATTGTGTTATTTACGCAGGAAATATTTGTATTACAGGAATAACTTGATAGTAGTCAT TTAACCTAAAACGAATGTTT
Product: HGE-14 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MDILNGDRTSSDYRNTVCYYIRAGKVSLCDLMEVLSDSIGELQKVFVCACSKDEKFSLLADKMSFVQSIVARKDGIVIYS IGGILAQDHSVLDFLYDTLFSCITATCNKDLSEFTSPLLFRDSIRVQMLEACALLVNIISIYHCFVQTYAPRHTIVPRDN DDETVLHVQLALSAYLNALHAAKSYYYLMSVVPKGEKMALSRFILHNAELALKVSELVDVDVPFFYRPRIGHLLYTMMDT IENSYSISRPDALTDEEKVLHVSLATEARIVFNFYMNRYVTESEAACSIQSKTSPVVKALIGAVGCMFLLCRECLLQAKL DNSLTRDIKSCITILRDEVYPIVFSYENELVSTSALACVVPIHLSHATKKLKAISLDLLLNSAESVALYNIASLYLEKAS SAWNIEAIKYRAMLPLYLFPNKKKQTTNTTTFTGAPLGTPQITSSQQVFYATDLDLTRKI
Sequences:
>Translated_460_residues MDILNGDRTSSDYRNTVCYYIRAGKVSLCDLMEVLSDSIGELQKVFVCACSKDEKFSLLADKMSFVQSIVARKDGIVIYS IGGILAQDHSVLDFLYDTLFSCITATCNKDLSEFTSPLLFRDSIRVQMLEACALLVNIISIYHCFVQTYAPRHTIVPRDN DDETVLHVQLALSAYLNALHAAKSYYYLMSVVPKGEKMALSRFILHNAELALKVSELVDVDVPFFYRPRIGHLLYTMMDT IENSYSISRPDALTDEEKVLHVSLATEARIVFNFYMNRYVTESEAACSIQSKTSPVVKALIGAVGCMFLLCRECLLQAKL DNSLTRDIKSCITILRDEVYPIVFSYENELVSTSALACVVPIHLSHATKKLKAISLDLLLNSAESVALYNIASLYLEKAS SAWNIEAIKYRAMLPLYLFPNKKKQTTNTTTFTGAPLGTPQITSSQQVFYATDLDLTRKI >Mature_460_residues MDILNGDRTSSDYRNTVCYYIRAGKVSLCDLMEVLSDSIGELQKVFVCACSKDEKFSLLADKMSFVQSIVARKDGIVIYS IGGILAQDHSVLDFLYDTLFSCITATCNKDLSEFTSPLLFRDSIRVQMLEACALLVNIISIYHCFVQTYAPRHTIVPRDN DDETVLHVQLALSAYLNALHAAKSYYYLMSVVPKGEKMALSRFILHNAELALKVSELVDVDVPFFYRPRIGHLLYTMMDT IENSYSISRPDALTDEEKVLHVSLATEARIVFNFYMNRYVTESEAACSIQSKTSPVVKALIGAVGCMFLLCRECLLQAKL DNSLTRDIKSCITILRDEVYPIVFSYENELVSTSALACVVPIHLSHATKKLKAISLDLLLNSAESVALYNIASLYLEKAS SAWNIEAIKYRAMLPLYLFPNKKKQTTNTTTFTGAPLGTPQITSSQQVFYATDLDLTRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51538; Mature: 51538
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILNGDRTSSDYRNTVCYYIRAGKVSLCDLMEVLSDSIGELQKVFVCACSKDEKFSLLA CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH DKMSFVQSIVARKDGIVIYSIGGILAQDHSVLDFLYDTLFSCITATCNKDLSEFTSPLLF HHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHH RDSIRVQMLEACALLVNIISIYHCFVQTYAPRHTIVPRDNDDETVLHVQLALSAYLNALH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH AAKSYYYLMSVVPKGEKMALSRFILHNAELALKVSELVDVDVPFFYRPRIGHLLYTMMDT HHHHHHEEEEECCCCHHHHHHHHHHHCCHHEEEEHHHHCCCCCEEECCHHHHHHHHHHHH IENSYSISRPDALTDEEKVLHVSLATEARIVFNFYMNRYVTESEAACSIQSKTSPVVKAL HHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHH IGAVGCMFLLCRECLLQAKLDNSLTRDIKSCITILRDEVYPIVFSYENELVSTSALACVV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHEEE PIHLSHATKKLKAISLDLLLNSAESVALYNIASLYLEKASSAWNIEAIKYRAMLPLYLFP EHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECC NKKKQTTNTTTFTGAPLGTPQITSSQQVFYATDLDLTRKI CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHCCC >Mature Secondary Structure MDILNGDRTSSDYRNTVCYYIRAGKVSLCDLMEVLSDSIGELQKVFVCACSKDEKFSLLA CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH DKMSFVQSIVARKDGIVIYSIGGILAQDHSVLDFLYDTLFSCITATCNKDLSEFTSPLLF HHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHH RDSIRVQMLEACALLVNIISIYHCFVQTYAPRHTIVPRDNDDETVLHVQLALSAYLNALH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH AAKSYYYLMSVVPKGEKMALSRFILHNAELALKVSELVDVDVPFFYRPRIGHLLYTMMDT HHHHHHEEEEECCCCHHHHHHHHHHHCCHHEEEEHHHHCCCCCEEECCHHHHHHHHHHHH IENSYSISRPDALTDEEKVLHVSLATEARIVFNFYMNRYVTESEAACSIQSKTSPVVKAL HHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHH IGAVGCMFLLCRECLLQAKLDNSLTRDIKSCITILRDEVYPIVFSYENELVSTSALACVV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHEEE PIHLSHATKKLKAISLDLLLNSAESVALYNIASLYLEKASSAWNIEAIKYRAMLPLYLFP EHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECC NKKKQTTNTTTFTGAPLGTPQITSSQQVFYATDLDLTRKI CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA