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The map label for this gene is prfB

Identifier: 88607366

GI number: 88607366

Start: 505933

End: 506988

Strand: Direct

Name: prfB

Synonym: APH_0479

Alternate gene names: NA

Gene position: 505933-506988 (Clockwise)

Preceding gene: 88606968

Following gene: 88606794

Centisome position: 34.39

GC content: 43.75

Gene sequence:

>1132_bases
ATGCATGGCAGGTCGGTAATTTTAGAAGATATATCAGAGATTGGTGAAGATCTAGCTTCGATAGCGAGGTGTCTTTGACA
TTGTGGGGCTAGAATCTACGTTGGAGAGCCTGGATCTAGAGTGCTCTTCACCTTCCTTATGGGATGACGCTGAAAAAGCA
AAAAGCTTGCTTAGTGAACGGTCGAGAGTGAGCGCCGTTCTCACATCTTTTCGTGTTTTAGAAAAAGAACATAAGGACTT
AGCTGAACTTGCAGAGATGATTTCTGACAGTGATGACAGAGACTTTCTTGCAACGATAAATGCTGAGCTTCAATCCTTGA
AGTTGCGTATCTCTCAGAAAAAGACTGAGTGCATGTTCTCTCACGAAGCTGATGCTAATAGTTGTTTCTTGACTATTCGT
TCTGGAGCTGGTGGAACCGAAAGTAGCGATTGGGTTTGCATGCTTTTACGCATGTATACAAAGTGGGCTGAATCTTTTCA
TGAGTTTACTGTTGAGACTGTTGATTCTGTTGACGGTGAGGAAACAGGTCTGAAGGCTGTTACTGTGAAAATATGTGGTA
TTGGCGCCTACGGGTGGGCACGTACTGAAAGTGGTATTCATAGGTTAGTTCGCATTTCTCCCTTTGACCATGCTGCAAAA
CGGCACACCAGCTTCGCTAGTGTTGAGGTATCTCCTGTTGTGGATCATGAAATTGACATAAAAATTCTAGAAAAGGATCT
TCGTATTGATACTTATCGTGCTTCTGGTGCTGGGGGGCAGCATGTTAATAAAACAGAAAGTGCGGTCCGTATAACACATA
TTCCCTCTGGCATGGTGGTACAATGTCAGACAAGCAGGTCGCAGCACCAAAACCGTGCTGAAGCCTACTCTTTACTTAAA
AGCCGTCTCTATGAAATGGAGCTGCAAGAAAAAGAGAAAAGAATGGCTCAAGATCATCAAAACAAGTGTGAAATTGGTTG
GGGGCATCAGATAAGATCCTATGTAATGCATCCATATCGTATGGTGAAGGACTTACGTACAGGACATGAAACTGGCAATG
TAGATGCAGTAATGAATGGAGACTTAGACGCTTTTATCACTGCGGCTCTCATGCGTGGATCTCTTGCCAAGGTACAGCGA
TCTGGATCTTAA

Upstream 100 bases:

>100_bases
TATTTATGTTAAAGATGCTGTTATGCTGCGTTTTACTGTATTTAGTATTTGGTAGGTTATCTAATAGAGTGTAGTTAGTA
TAGCATTTTGATGGTTTGTG

Downstream 100 bases:

>100_bases
AATATTCCATGGTGCTTACCTATGGGATAGGATAGCGATACGCAAAATCACTTGAGAACATAATACGGCAGTACGGGTAT
GGCCCACGCTGAAGAAGATT

Product: peptide chain release factor 2, programmed frameshift

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>376_residues
MHGRSVILEDISEIGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDL
AELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFH
EFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDL
RIDTYRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDHQNKCEIGW
GHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALMRGSLAKVQRSGS

Sequences:

>Translated_352_residues
LRSRSLYLGKRSTHESRSDKSV*VSIHYCIYIASFMSCT*VLHHTIWMHYIGSYLMPPTNFTLVLMILSHSFLFFLQLHF
IETAFK*RVGFSTVLVLRPACLTLYHHARGNMCYTDRTFCFINMLPPSTRSTISINTKILF*NFYVNFMIHNRRYLNTSE
AGVPFCSMVKGRNAN*PMNTTFSTCPPVGANTTYFHSNSLQTCFLTVNRINSLNSKLMKRFSPLCIHA*KHANPIATFGS
TSSRTNSQETTISISFVREHALSLFLRDTQLQGLKLSIYRCKKVSVITVRNHLCKFS*VLMFFF*NTKRCENGAHSRPFT
KQAFCFFSVIP*GR*RAL*IQALQRRF*PHNV
>Mature_352_residues
LRSRSLYLGKRSTHESRSDKSV*VSIHYCIYIASFMSCT*VLHHTIWMHYIGSYLMPPTNFTLVLMILSHSFLFFLQLHF
IETAFK*RVGFSTVLVLRPACLTLYHHARGNMCYTDRTFCFINMLPPSTRSTISINTKILF*NFYVNFMIHNRRYLNTSE
AGVPFCSMVKGRNAN*PMNTTFSTCPPVGANTTYFHSNSLQTCFLTVNRINSLNSKLMKRFSPLCIHA*KHANPIATFGS
TSSRTNSQETTISISFVREHALSLFLRDTQLQGLKLSIYRCKKVSVITVRNHLCKFS*VLMFFF*NTKRCENGAHSRPFT
KQAFCFFSVIP*GR*RAL*IQALQRRF*PHNV

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38884; Mature: 38884

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LRSRSLYLGKRSTHESRSDKSVVSIHYCIYIASFMSCTVLHHTIWMHYIGSYLMPPTNFT
CCCCCEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVLMILSHSFLFFLQLHFIETAFKRVGFSTVLVLRPACLTLYHHARGNMCYTDRTFCFIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCCCCEEEECCEEEEEE
MLPPSTRSTISINTKILFNFYVNFMIHNRRYLNTSEAGVPFCSMVKGRNANPMNTTFSTC
ECCCCCCCEEEEEHEEEEEEEEEEEEECCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCC
PPVGANTTYFHSNSLQTCFLTVNRINSLNSKLMKRFSPLCIHAKHANPIATFGSTSSRTN
CCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCC
SQETTISISFVREHALSLFLRDTQLQGLKLSIYRCKKVSVITVRNHLCKFSVLMFFFNTK
CCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHH
RCENGAHSRPFTKQAFCFFSVIPGRRALIQALQRRFPHNV
HCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA