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The map label for this gene is yfkH [H]

Identifier: 88606794

GI number: 88606794

Start: 509012

End: 509845

Strand: Direct

Name: yfkH [H]

Synonym: APH_0481

Alternate gene names: 88606794

Gene position: 509012-509845 (Clockwise)

Preceding gene: 88607366

Following gene: 88607198

Centisome position: 34.6

GC content: 40.41

Gene sequence:

>834_bases
ATGATACTGCAGAAAGTGTTGACGTTTTTCAAGTGTATTTGTAAAGCCGTTATTGATTTTAGAGATCATGATGGGATGGA
GTATGCAGGGTATTTGTCCTTTATAGTACTTTTGTCGATGTTTCCTTTTTTCGTGTTCTTCAATGCTCTGACTTCCTCTA
TAGTGTCAGTATTGGATAAGGATCAATTTCTATATACAAGGCTTTTTGATGTACTATCAGGTGAATTGCCGCACGATACC
ATGGATGCACTATTGCCTAGAATTGAGGAGATCCTATCAGGGCCTCCCCAGAGCCTGCTGACTGTCGCTATAGGTGGTGT
AATATGGACTGCTTCCTCAGTTATCGAGGGGATAAGGCACGTGTTGAATAAAGCCCTTAGGGTATCAGCGCCTCCACCAT
ACATATTGGGCCGTATGTTTAGTATACTGCAGTTTTTGATAATAGTTGCTGTGATGATGCTCAGTGTATTATTCGCGGTA
TTGGTCCCTATAATTTTCGAAGTGGTCGGTAGACATTGGGAGTTCCTGAGGTTTGTAGTTAGCAAAGTGGTACTTTTTAT
TGCTGTTTCTTGGATATACTTCATGGTTCCAAATGTAAGGCAGAATATACTGGTCGTGCTGCCAGGTGCAGCTGTTGTAA
CCGCAACATGGACGTTAACATCAATGGCTTTTTCGTGGTATCTCTCAACCTTTCAAGTTCTCAAGACAATATACGGTAAT
CTTACAGGTATTATAGCAGCGATGCTGTTTTTCTACATACTTAGCATATTTTTCATATACGGAGCAGAACTGAATTATAG
ACTCTCAAATCGTCACTCTAGTGTACATATATAG

Upstream 100 bases:

>100_bases
GATGTGTATTTAAAATGGGGATAAATGGGAATTGTTTTTGCAGTAAGATGCGTCATAATACAACCTCCCGGGAATATATA
TCGCATACGTACTAAAAGAA

Downstream 100 bases:

>100_bases
AGTACGACTACTGTGGAAAATGTGTTACCATACTTCCTATTTTATGGGAGTTGTGAGGTTCCATGTACGAACATGCACAT
TGGTTTCAAGAAGAGAAAGT

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MILQKVLTFFKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQFLYTRLFDVLSGELPHDT
MDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLNKALRVSAPPPYILGRMFSILQFLIIVAVMMLSVLFAV
LVPIIFEVVGRHWEFLRFVVSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQVLKTIYGN
LTGIIAAMLFFYILSIFFIYGAELNYRLSNRHSSVHI

Sequences:

>Translated_277_residues
MILQKVLTFFKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQFLYTRLFDVLSGELPHDT
MDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLNKALRVSAPPPYILGRMFSILQFLIIVAVMMLSVLFAV
LVPIIFEVVGRHWEFLRFVVSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQVLKTIYGN
LTGIIAAMLFFYILSIFFIYGAELNYRLSNRHSSVHI
>Mature_277_residues
MILQKVLTFFKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQFLYTRLFDVLSGELPHDT
MDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLNKALRVSAPPPYILGRMFSILQFLIIVAVMMLSVLFAV
LVPIIFEVVGRHWEFLRFVVSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQVLKTIYGN
LTGIIAAMLFFYILSIFFIYGAELNYRLSNRHSSVHI

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31359; Mature: 31359

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]