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The map label for this gene is nuoJ [H]

Identifier: 88607226

GI number: 88607226

Start: 451464

End: 452069

Strand: Direct

Name: nuoJ [H]

Synonym: APH_0435

Alternate gene names: 88607226

Gene position: 451464-452069 (Clockwise)

Preceding gene: 88607132

Following gene: 88607796

Centisome position: 30.69

GC content: 42.41

Gene sequence:

>606_bases
ATGGTTGGGTTCTTATTTTTCTGCTTTGCTGGGATGGTAGTGTTTTCCGCAGTAGCAGTTGTGATATCTTCTAACCCAGT
CTATGCAGTTCTGAGCCTGATCTTGACATTTTTTATATCTAGTGTTCTGTTCATCCTGCTTGGTGCGGAACTGGTAGCTA
TGCTGCTTGTTGTTGTGTATGTGGGGGCAGTGGCGGTTTTGTTTTTATTTGTGGTGATGATGCTAGATATGGATTTTGTC
AAGTCCTCCCATGGGTTTGTTAGGTATTATCCTATATGTGTTGCACTTGCTACGGCGCTTTTTGGATGTGCGACGTATGC
GATTTTCCATACTAAGGCTGCTTTCATTAGGGGTATAGGTGAGGCAGGAGCTAGCGCTATGGGAAATGTATTTCTGATTG
GATCTCAGATGTACACGAAATATTTTTACGCATTTCAAATGTCGGGCATTTTACTTTTAGTTGCTTCTATAGGGGCTTTG
GTTTTGACGGTGAGGTCAAAGGCTGTGAAATCGCGCAAGCAGAATGTGTACGCACAAGTTGATCGTTCTTCAAAGGTGGA
GTTATGCTCTCCTGCTGTCTGTAAAGGTATTGAAGATATTGATTAA

Upstream 100 bases:

>100_bases
GATTCTCAATGGCATAGATGCTTTTTTTGGGATACACAGTAAATTGACTTGATAACTTAAACTGTTATATTATCATCCCG
GTGGTTGTAGGTTCTGCTAA

Downstream 100 bases:

>100_bases
TTTTCGAATTGTGTATTTTTGGAGATAGCACGGGGTGTAACGCATGGATTTTTTAATCAGTTCTGGCATAACGTTGAGTC
ATTTTCTAGCACTCGCTGCT

Product: NADH dehydrogenase I, J subunit

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVYVGAVAVLFLFVVMMLDMDFV
KSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIGEAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGAL
VLTVRSKAVKSRKQNVYAQVDRSSKVELCSPAVCKGIEDID

Sequences:

>Translated_201_residues
MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVYVGAVAVLFLFVVMMLDMDFV
KSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIGEAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGAL
VLTVRSKAVKSRKQNVYAQVDRSSKVELCSPAVCKGIEDID
>Mature_201_residues
MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVYVGAVAVLFLFVVMMLDMDFV
KSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIGEAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGAL
VLTVRSKAVKSRKQNVYAQVDRSSKVELCSPAVCKGIEDID

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 21677; Mature: 21677

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVY
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGAVAVLFLFVVMMLDMDFVKSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGALVLTVRSKAVKSRKQNVYAQV
HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRSSKVELCSPAVCKGIEDID
CCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVY
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGAVAVLFLFVVMMLDMDFVKSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGALVLTVRSKAVKSRKQNVYAQV
HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRSSKVELCSPAVCKGIEDID
CCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]