Click here to switch to the map view.

The map label for this gene is 88607223

Identifier: 88607223

GI number: 88607223

Start: 122729

End: 122941

Strand: Direct

Name: 88607223

Synonym: APH_0116

Alternate gene names: NA

Gene position: 122729-122941 (Clockwise)

Preceding gene: 88607194

Following gene: 88607924

Centisome position: 8.34

GC content: 37.56

Gene sequence:

>213_bases
GTGCTGGATTTGAGGTGCTGTTACTCAGGAGTTTCATGTATGGAATTAGTTCAGGGTTGCGTGAATACGTTTACGTTACA
GCATCTAATATCTAAGATTTTTGGTGCTATTATCAGGCACTTGGTTGATACCAGGATAAGTTATCTAGGATATCATTTCA
GGATAAGGGTAATGAATTATGTTGTTGAGAAGTTAGTGTGCGCTTTCTTTTGA

Upstream 100 bases:

>100_bases
ATTCAATTATTAAGAACGGAGAGATTAAGTGTTGAGTAAGCACAACGCAATCCAATCCGTCTTTTATCCTGAATACCCTA
GCTAAGTAACGGCGAAATTA

Downstream 100 bases:

>100_bases
CTTCACAAGTACTTCCAGGTGCGTTTCTACCGCGCGTGCTTGGTCAACTTTTGGTGTTATGCATATGTTACCAAGCGTTG
TATATCAAATCTATGTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLDLRCCYSGVSCMELVQGCVNTFTLQHLISKIFGAIIRHLVDTRISYLGYHFRIRVMNYVVEKLVCAFF

Sequences:

>Translated_70_residues
MLDLRCCYSGVSCMELVQGCVNTFTLQHLISKIFGAIIRHLVDTRISYLGYHFRIRVMNYVVEKLVCAFF
>Mature_70_residues
MLDLRCCYSGVSCMELVQGCVNTFTLQHLISKIFGAIIRHLVDTRISYLGYHFRIRVMNYVVEKLVCAFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8137; Mature: 8137

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLRCCYSGVSCMELVQGCVNTFTLQHLISKIFGAIIRHLVDTRISYLGYHFRIRVMNY
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEKLVCAFF
HHHHHHHHHC
>Mature Secondary Structure
MLDLRCCYSGVSCMELVQGCVNTFTLQHLISKIFGAIIRHLVDTRISYLGYHFRIRVMNY
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEKLVCAFF
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA