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The map label for this gene is glyQ [H]

Identifier: 88607203

GI number: 88607203

Start: 167888

End: 168739

Strand: Reverse

Name: glyQ [H]

Synonym: APH_0165

Alternate gene names: 88607203

Gene position: 168739-167888 (Counterclockwise)

Preceding gene: 88607797

Following gene: 88607831

Centisome position: 11.47

GC content: 41.78

Gene sequence:

>852_bases
GTGAACTTCCAGAGCATAGTAAGAAATTTGGAGAGATACTGGGAGGACTATGGGTGCTCGATAGTACATCCTTATACCAC
AGAACTCGGGGCAGGAACTCTACACCCCGCAACTTCTCTTGAGGTTCTTTCTGGAAAGAACACCATGGTAGCGTATGTAC
AGCCTGTTATCCGTCCATGCGATGGACGGTATGGGGATAACCCCAATAGATTGTACCAGCATCATCAGTATCAAGTTATA
ATACAGCCTTCTAGGACTACCTTGCGGGATGATTATCTTCGGAGCCTGGAAAAAATAGGAATATCTACTACTGACTTTGA
TATACGGTTCATTGAAGATGACTGGGAAAACCCTAGCATAGGTGCATATGGTTATGGGTGGGAAGTTTCTTGTAATGGTA
TGGAAATTACTCAATTCACTTATATGCAGCAAGTCGGGGGAATAGAGTGCTCTGTCATTCCTGGAGAAATAGCTTATGGC
CTTGAAAGAATTGCCATGGTACTCCAAGGGGTAGATAACGTATACGATATTGTCTGGAATAGTGCTGGCGTTAAATACGG
GGAAATATTTAAAGATAGAGAGAGGGAATTTTCAGCTCTTTCTTTCGAACATTATGATACAGATTTCTTGGTCCATAGCT
TTGAGAAAAATGAAGAAATGTGCCTCGTGATGGTACAAAATGATCTACCCATTGCTGGGTATGACTTATGTCTTAAAGCT
AGTCATATTCTAAACTTGCTTGAGGCTAGGGGGGTTATTGGCGTCAATGAACGGGCCTCTTACATACTCAGAGTTAGGAA
AATGACTAATATGTGCTGCCAATCTTATGTAAAGCTATACAAAGTAGCGTGA

Upstream 100 bases:

>100_bases
AACTGCTGCTTCTCATTTTCACCAAAATATGGATGTACCTTCTTCAATATCATAGTTCAACGCATCATCTGGGCGGTTGT
CATGATTTTTATCTTATCTT

Downstream 100 bases:

>100_bases
TATGTCTCTTGATTTAGTTTTTGAAATATTATGCGAACAGATGCCATCTAAAATGATGGATATTGCATTGGGGTATCTGA
AAAATACCATCTGTTCTGGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNFQSIVRNLERYWEDYGCSIVHPYTTELGAGTLHPATSLEVLSGKNTMVAYVQPVIRPCDGRYGDNPNRLYQHHQYQVI
IQPSRTTLRDDYLRSLEKIGISTTDFDIRFIEDDWENPSIGAYGYGWEVSCNGMEITQFTYMQQVGGIECSVIPGEIAYG
LERIAMVLQGVDNVYDIVWNSAGVKYGEIFKDREREFSALSFEHYDTDFLVHSFEKNEEMCLVMVQNDLPIAGYDLCLKA
SHILNLLEARGVIGVNERASYILRVRKMTNMCCQSYVKLYKVA

Sequences:

>Translated_283_residues
MNFQSIVRNLERYWEDYGCSIVHPYTTELGAGTLHPATSLEVLSGKNTMVAYVQPVIRPCDGRYGDNPNRLYQHHQYQVI
IQPSRTTLRDDYLRSLEKIGISTTDFDIRFIEDDWENPSIGAYGYGWEVSCNGMEITQFTYMQQVGGIECSVIPGEIAYG
LERIAMVLQGVDNVYDIVWNSAGVKYGEIFKDREREFSALSFEHYDTDFLVHSFEKNEEMCLVMVQNDLPIAGYDLCLKA
SHILNLLEARGVIGVNERASYILRVRKMTNMCCQSYVKLYKVA
>Mature_283_residues
MNFQSIVRNLERYWEDYGCSIVHPYTTELGAGTLHPATSLEVLSGKNTMVAYVQPVIRPCDGRYGDNPNRLYQHHQYQVI
IQPSRTTLRDDYLRSLEKIGISTTDFDIRFIEDDWENPSIGAYGYGWEVSCNGMEITQFTYMQQVGGIECSVIPGEIAYG
LERIAMVLQGVDNVYDIVWNSAGVKYGEIFKDREREFSALSFEHYDTDFLVHSFEKNEEMCLVMVQNDLPIAGYDLCLKA
SHILNLLEARGVIGVNERASYILRVRKMTNMCCQSYVKLYKVA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=280, Percent_Identity=50.3571428571429, Blast_Score=299, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 32431; Mature: 32431

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQSIVRNLERYWEDYGCSIVHPYTTELGAGTLHPATSLEVLSGKNTMVAYVQPVIRPC
CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHCC
DGRYGDNPNRLYQHHQYQVIIQPSRTTLRDDYLRSLEKIGISTTDFDIRFIEDDWENPSI
CCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
GAYGYGWEVSCNGMEITQFTYMQQVGGIECSVIPGEIAYGLERIAMVLQGVDNVYDIVWN
CCCCCCEEEEECCEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
SAGVKYGEIFKDREREFSALSFEHYDTDFLVHSFEKNEEMCLVMVQNDLPIAGYDLCLKA
CCCCCHHHHHHHHHHHHHHEEECCCCCHHEEEECCCCCCEEEEEEECCCCCCCHHHHHHH
SHILNLLEARGVIGVNERASYILRVRKMTNMCCQSYVKLYKVA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFQSIVRNLERYWEDYGCSIVHPYTTELGAGTLHPATSLEVLSGKNTMVAYVQPVIRPC
CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHCC
DGRYGDNPNRLYQHHQYQVIIQPSRTTLRDDYLRSLEKIGISTTDFDIRFIEDDWENPSI
CCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
GAYGYGWEVSCNGMEITQFTYMQQVGGIECSVIPGEIAYGLERIAMVLQGVDNVYDIVWN
CCCCCCEEEEECCEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
SAGVKYGEIFKDREREFSALSFEHYDTDFLVHSFEKNEEMCLVMVQNDLPIAGYDLCLKA
CCCCCHHHHHHHHHHHHHHEEECCCCCHHEEEECCCCCCEEEEEEECCCCCCCHHHHHHH
SHILNLLEARGVIGVNERASYILRVRKMTNMCCQSYVKLYKVA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA