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The map label for this gene is perM [C]

Identifier: 88607126

GI number: 88607126

Start: 1052746

End: 1053837

Strand: Reverse

Name: perM [C]

Synonym: APH_0995

Alternate gene names: 88607126

Gene position: 1053837-1052746 (Counterclockwise)

Preceding gene: 88607836

Following gene: 88607408

Centisome position: 71.63

GC content: 39.1

Gene sequence:

>1092_bases
GTGAAGTACATAAATCTTCTTTTAGTCGCGCTAGCTGTTGTGGGTATTGGGTTATTCTTACGGCCGGTGCTATACGCTTG
TATTTATGCCTTGTTTATAGCGTACCTTTTGAATCCTATCGTGACAAAATTAGTGTTGATAGGCATGTCACGCGCTGTAG
CATCATTTGTGATAATATGTGCCTCTGCGGGCGTAATAGGAACTCTCATTGTTATGTTGATGCCTGTACTATACTCTCAG
GCATTGGGTGTAATAAAGCTTTTAATAGATAGAGTGCCATTCTTAAATCTTGAAGACATTAAGGATATACTTAGTTCAAG
TGGGTTACCTTCCTACCAAGAAATAAAAAGTGCAACCGAGAATCCATTGAACTTATTAACAAGTGACTTATTTCGTGGAG
ATGGTGCAGAATTTCTAAAGCTATTTAAAGATGCTCCAAGTTACTTCGTGAAGGCTGTAGCTGGTATTGCGCATTCTAGC
TTAGGCATAGGTTCTTCTATTGTAACTATACTAACTTCGCTATTGTTATCATTTTACATTTTGGCTAATTGGCCGAGCAT
TACTAAAATTGCTTTAGAATTAATCCCTCGGTCTTATGTGCGTGATTTCGCTCTGTGTTTTCATAAAATTGATGAAGTAA
TATCTTCGTACCTCAGGGGGCAGACTTTGGTTTGCCTCGTGCTAGCATGCTACTATAGCTTTTGCTTTGTTGTGATAAGG
CTTGAGTATTCCCTTGTTATGGGTTTTGTTTCTGGGTTGCTGACATTTTTACCTTACATAGGACCATCGCTGTGTTGCAT
TTTAAGTGTTTGCATTGCAATTTCACAGGGATTTGGGATAACTAAAGTTGTACTAGTGGCTTTGATGTTTTTAGTGGGGC
AAATGATTGAATCCTATGTGGTAACTCCTGGGATCGTGGGGAAAAGGTTAGCATTGAATCAAGCCTGGTTAGTTATAGGT
GTTGTGGTTTTCAGCTCGCATGCTGGTTTTTGGGGTGCACTTTTGTCGGTTCCGTTTACTGCGATACTCAGTGTTTTGAT
ACAGTTTGCTGTTAAAAAGTATAAGACAAGCAATTTCTATTTGAGCGAGTAA

Upstream 100 bases:

>100_bases
CTTTCAAAATTATTGAATTCTTGACTCAAGGTGCATACCATCTCCACCATTACGTGTTATACGCTACGTAGGAAGGGACT
TAGCTGAGATAGTGGGTGGA

Downstream 100 bases:

>100_bases
TACTATGTACACACAACTGAAGTTGTTTGACGTTAAAGAGATGCACTCTTACCAATGTTCAGATTATGTTGTCTTAGATA
GTAATAGGCACACATATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLVLIGMSRAVASFVIICASAGVIGTLIVMLMPVLYSQ
ALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATENPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSS
LGIGSSIVTILTSLLLSFYILANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR
LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYVVTPGIVGKRLALNQAWLVIG
VVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYKTSNFYLSE

Sequences:

>Translated_363_residues
MKYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLVLIGMSRAVASFVIICASAGVIGTLIVMLMPVLYSQ
ALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATENPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSS
LGIGSSIVTILTSLLLSFYILANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR
LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYVVTPGIVGKRLALNQAWLVIG
VVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYKTSNFYLSE
>Mature_363_residues
MKYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLVLIGMSRAVASFVIICASAGVIGTLIVMLMPVLYSQ
ALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATENPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSS
LGIGSSIVTILTSLLLSFYILANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR
LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYVVTPGIVGKRLALNQAWLVIG
VVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYKTSNFYLSE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=350, Percent_Identity=23.1428571428571, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39581; Mature: 39581

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLVLIGMSRAVASFVIIC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAGVIGTLIVMLMPVLYSQALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCC
NPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSSLGIGSSIVTILTSLLLSFYI
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VTPGIVGKRLALNQAWLVIGVVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYKTSNFY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSE
CCC
>Mature Secondary Structure
MKYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLVLIGMSRAVASFVIIC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAGVIGTLIVMLMPVLYSQALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCC
NPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSSLGIGSSIVTILTSLLLSFYI
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VTPGIVGKRLALNQAWLVIGVVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYKTSNFY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]