Definition | Anaplasma phagocytophilum HZ, complete genome. |
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Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is 88607836
Identifier: 88607836
GI number: 88607836
Start: 1054702
End: 1054956
Strand: Reverse
Name: 88607836
Synonym: APH_0996
Alternate gene names: NA
Gene position: 1054956-1054702 (Counterclockwise)
Preceding gene: 88607221
Following gene: 88607126
Centisome position: 71.7
GC content: 41.18
Gene sequence:
>255_bases ATGACAATCCTTCCGGGTATAGGTGACTTATTTTCTTTTATATCGCTTTCACAGGTTACTATGAGCGATATTTGTTGGGT AAGGGTCATAGCTGGTGATATCATTGGTTTCTTGTATGCTTCTTTCTATACGGGTTCTGTCAGCAATCGTCAAAATTCTG GGGAGGGGATTGGCAAGTTTCTTGCATGTGTGTTACGCACACATGCATTTTCGTCAACGGCCTTATTAGCTCCGTATATC CAATATGCTAGATAG
Upstream 100 bases:
>100_bases AGCTGGAGTGCGTAAATAACGACAATTTAGAGAAAATTGCCAATCCCGCTAAGCTATAAGCTAACCTTACATCACATCAA AGAGGACTGTTTTTTGAGAT
Downstream 100 bases:
>100_bases CGTAGTGCATTTTGCAATGCTTTGGGCCATGAACTGAAGATTATTCGAGTTGTTTAAGGCAATTGCATGCTTGATTCTTT GACCTCAAAGTTATATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MTILPGIGDLFSFISLSQVTMSDICWVRVIAGDIIGFLYASFYTGSVSNRQNSGEGIGKFLACVLRTHAFSSTALLAPYI QYAR
Sequences:
>Translated_84_residues MTILPGIGDLFSFISLSQVTMSDICWVRVIAGDIIGFLYASFYTGSVSNRQNSGEGIGKFLACVLRTHAFSSTALLAPYI QYAR >Mature_83_residues TILPGIGDLFSFISLSQVTMSDICWVRVIAGDIIGFLYASFYTGSVSNRQNSGEGIGKFLACVLRTHAFSSTALLAPYIQ YAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9130; Mature: 8998
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILPGIGDLFSFISLSQVTMSDICWVRVIAGDIIGFLYASFYTGSVSNRQNSGEGIGKF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LACVLRTHAFSSTALLAPYIQYAR HHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure TILPGIGDLFSFISLSQVTMSDICWVRVIAGDIIGFLYASFYTGSVSNRQNSGEGIGKF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LACVLRTHAFSSTALLAPYIQYAR HHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA