| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88606958
Identifier: 88606958
GI number: 88606958
Start: 606138
End: 606272
Strand: Reverse
Name: 88606958
Synonym: APH_0577
Alternate gene names: NA
Gene position: 606272-606138 (Counterclockwise)
Preceding gene: 88607352
Following gene: 88607234
Centisome position: 41.21
GC content: 37.04
Gene sequence:
>135_bases ATGCCAGAATCTCAATGCAAGGCTATAGTAGCTTCACTAGGCAATGCAAAGCGAAATGTTCGTGTAGTAAATTGGAAAAC GTACGCAATATATGAAAAGATAGACAATGAGAATTGGGGAATGTTCATACAGTAA
Upstream 100 bases:
>100_bases CAGTCAGATATAGATACCGCCCTGCTCTGGGGCGCGCAGCAACATCCGGTTGTATATTCAATAGCCGCTTCATCTAAAGC AGCAACACGAGCATTTTCAA
Downstream 100 bases:
>100_bases ATTGAAGAGCATGTGTAATATGCAGAAAGACAGCAGAAATAACGATACCAACTCCAACACACTCACAATAAAAAAGCCGA AGTAGCTCCAAGCTAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MPESQCKAIVASLGNAKRNVRVVNWKTYAIYEKIDNENWGMFIQ
Sequences:
>Translated_44_residues MPESQCKAIVASLGNAKRNVRVVNWKTYAIYEKIDNENWGMFIQ >Mature_43_residues PESQCKAIVASLGNAKRNVRVVNWKTYAIYEKIDNENWGMFIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5117; Mature: 4986
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESQCKAIVASLGNAKRNVRVVNWKTYAIYEKIDNENWGMFIQ CCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEC >Mature Secondary Structure PESQCKAIVASLGNAKRNVRVVNWKTYAIYEKIDNENWGMFIQ CHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA