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The map label for this gene is yhgI [C]

Identifier: 88606830

GI number: 88606830

Start: 74057

End: 74623

Strand: Direct

Name: yhgI [C]

Synonym: APH_0067

Alternate gene names: 88606830

Gene position: 74057-74623 (Clockwise)

Preceding gene: 88607694

Following gene: 88607118

Centisome position: 5.03

GC content: 42.15

Gene sequence:

>567_bases
ATGTTTATACAGATTGAGAGCACTCCAAATCCAGATACGTTAAAGTTTCTATTGAGCGCTGAAGTAGTGGGAATAAATAG
TGGTGCTGAGTTTTTAAGTGCTGATGATGCGCAAGCCTCTCCTTTAGCAAGGTTATTATTTGAAGTTGAGGGTGTAGAAA
AGGTGTTTTTTGGCGGAGATTTTGTGTCAATCACAAAGGCAGAAAACATATTGTGGGAGGTGTTGAAACCAGAAGTGCTT
GTGGTTATGACAGATTACTGCTTGCTGCAAGGGACAGATAAGGAACACGTTCAGGCTAGTGCAGAAGATGAGGAAAAAGA
GTTTTTTGATGAGAAAGACTCAGAAATAGTGCAGCAGGTCAAGGAGCTGATAGAGAATTACGTAAAACCTGCGGTCGCCC
AGGATGGTGGTGACATAAAGTTTAGGGGATATAAAGAAGGGGTTGTGTTTGTCAAACTCAGAGGTGCTTGTTCTGGATGT
CCTAGTGCTGCAGTGACTCTCAAAGATGGTGTGTATGGAATGCTGAGTTACTATATTCCCGCTATAAAGGCTGTCGAAAG
CATATGA

Upstream 100 bases:

>100_bases
TTGCGCTATATACTACACTACACTGCCTATACTGCACTATTCAGCCTGCGCAGGAGCAGGAATTATACCCTAAGGGTTCA
GATAATTGCAAGGTTTGTTT

Downstream 100 bases:

>100_bases
CAACCTTTTGCTAGATATATCGTTTGGATAGCAATTGATCTAGTAACTAGTAGTGCAATTGCTGATCTTAAGAAGTACTG
TATATCCTGTTATCTAGGCT

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Protein; NifU Related Protein; NifU-Like Domain Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGDFVSITKAENILWEVLKPEVL
VVMTDYCLLQGTDKEHVQASAEDEEKEFFDEKDSEIVQQVKELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGC
PSAAVTLKDGVYGMLSYYIPAIKAVESI

Sequences:

>Translated_188_residues
MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGDFVSITKAENILWEVLKPEVL
VVMTDYCLLQGTDKEHVQASAEDEEKEFFDEKDSEIVQQVKELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGC
PSAAVTLKDGVYGMLSYYIPAIKAVESI
>Mature_188_residues
MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGDFVSITKAENILWEVLKPEVL
VVMTDYCLLQGTDKEHVQASAEDEEKEFFDEKDSEIVQQVKELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGC
PSAAVTLKDGVYGMLSYYIPAIKAVESI

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593021, Length=189, Percent_Identity=39.6825396825397, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI50593025, Length=191, Percent_Identity=39.7905759162304, Blast_Score=154, Evalue=3e-38,
Organism=Homo sapiens, GI50593023, Length=78, Percent_Identity=43.5897435897436, Blast_Score=93, Evalue=1e-19,
Organism=Homo sapiens, GI50593019, Length=78, Percent_Identity=43.5897435897436, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17541876, Length=187, Percent_Identity=41.7112299465241, Blast_Score=156, Evalue=6e-39,
Organism=Saccharomyces cerevisiae, GI6322811, Length=204, Percent_Identity=32.843137254902, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45551492, Length=188, Percent_Identity=46.2765957446808, Blast_Score=175, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24643765, Length=188, Percent_Identity=46.2765957446808, Blast_Score=175, Evalue=2e-44,
Organism=Drosophila melanogaster, GI45556188, Length=188, Percent_Identity=46.2765957446808, Blast_Score=175, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20627; Mature: 20627

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGD
CEEEECCCCCHHHHHHEEHHEEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCEEEECCC
FVSITKAENILWEVLKPEVLVVMTDYCLLQGTDKEHVQASAEDEEKEFFDEKDSEIVQQV
EEEEHHHHHHHHHHHCCCEEEEEECHHEEECCCHHHHCCCCCHHHHHHHCCCHHHHHHHH
KELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGCPSAAVTLKDGVYGMLSYYIP
HHHHHHHHCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHH
AIKAVESI
HHHHHHCC
>Mature Secondary Structure
MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGD
CEEEECCCCCHHHHHHEEHHEEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCEEEECCC
FVSITKAENILWEVLKPEVLVVMTDYCLLQGTDKEHVQASAEDEEKEFFDEKDSEIVQQV
EEEEHHHHHHHHHHHCCCEEEEEECHHEEECCCHHHHCCCCCHHHHHHHCCCHHHHHHHH
KELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGCPSAAVTLKDGVYGMLSYYIP
HHHHHHHHCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHH
AIKAVESI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA