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The map label for this gene is yccZ [C]

Identifier: 87201235

GI number: 87201235

Start: 3441276

End: 3441989

Strand: Direct

Name: yccZ [C]

Synonym: Saro_3223

Alternate gene names: 87201235

Gene position: 3441276-3441989 (Clockwise)

Preceding gene: 87201233

Following gene: 87201236

Centisome position: 96.62

GC content: 61.06

Gene sequence:

>714_bases
ATGGCTAAGTTTTTATCCCGGCGAGCCACTACTTCGGCAATCGCGATTTCGTTTTCGATCGGTCTGGCCGGGTGTGGTTC
TCCACCTGTGCGGGTAGGCCTCGTCAATTCAACCCCTGTACAAGAGTACGGACAGGGCGATTATTCGGCCAGCGAGCAGT
CCGAGTACTTGCTCCGCCCCTCCGATGTCATTGCAATCACCGTTTTCCGGGAACCGGATCTTTCGGTTGAAAGCATTCCG
GTTGGGGCGGACGGTACGATCTCGCTGCCGATGATCGGCCCGGTCAAGGTCGACGGCCTGACCACGCGCGGCGTGGAGGA
GCTGGTTGCCAGCAAGCTTTCGTCCGCCGCTCTCGTGAACCCCAGCGTCAACGTCAACGTGTTGCAGTTCGGCTCGCATG
TCGTGACGGTCGAGGGTTCCGTCGAAAAACCGGGAATGTACTCGTTCAAGCCCGGAACCCGGCTATCGGGTGCCATGGCC
CTGGCGGGTGGCTCGAGCCGCGTCGCCAAACTCAGGGAAGTGGCGGTGTTCCGCCAGACCCCGCGTGGCATCGCGGTTGC
GAAGTTCGACTATGCTGCGGTCCGTGCAGGCACGATGATGGATCCGGTGCTGTTCCCCAACGACAGGGTCGTGGTCGGGA
CTTCCGGGCTGTCGCAGTTCTGGCAGGACCTGCTCAAGACTCTACCGGCTTTCGCGCTGTTCACGAACATCTGA

Upstream 100 bases:

>100_bases
CCCGCGGCAACCGCACAAGCAACACACCCCCGCTAGGCTTGCGCTGCATTGGCGCGGGGTCTATGCGGAAACACGTATCA
AAGGCAGGGTAATCTCGGGA

Downstream 100 bases:

>100_bases
CGCACAGCCCCTTGCCAAGACATTCAACAGGACCGCTGCAAGCATGATAGACGCTCAAAATCGAGGTTCTTGGTCGGACC
AGTACCTTCCGGGACACGAG

Product: polysaccharide export protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis/Export Protein; Polysaccharide Export Outer Membrane Protein; Polysaccharide Export-Related Protein; Polysaccharide Export Periplasmic Protein; Periplasmic Polysaccharide Export Protein; Capsular Polysaccharide Export Protein; Polysaccharide Biosynthesis; Periplasmic Protein Involved In Polysaccharide Export; Polysaccharide Export Protein EpsE; Polysaccharide Export-Like Protein; Exopolysaccharide Biosynthesis/Export Protein; Xanthan Biosynthesis Polysaccharide Export Protein GumB; Outer Membrane Xanthan Exporter; Capsule Polysaccharide Export Protein

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAKFLSRRATTSAIAISFSIGLAGCGSPPVRVGLVNSTPVQEYGQGDYSASEQSEYLLRPSDVIAITVFREPDLSVESIP
VGADGTISLPMIGPVKVDGLTTRGVEELVASKLSSAALVNPSVNVNVLQFGSHVVTVEGSVEKPGMYSFKPGTRLSGAMA
LAGGSSRVAKLREVAVFRQTPRGIAVAKFDYAAVRAGTMMDPVLFPNDRVVVGTSGLSQFWQDLLKTLPAFALFTNI

Sequences:

>Translated_237_residues
MAKFLSRRATTSAIAISFSIGLAGCGSPPVRVGLVNSTPVQEYGQGDYSASEQSEYLLRPSDVIAITVFREPDLSVESIP
VGADGTISLPMIGPVKVDGLTTRGVEELVASKLSSAALVNPSVNVNVLQFGSHVVTVEGSVEKPGMYSFKPGTRLSGAMA
LAGGSSRVAKLREVAVFRQTPRGIAVAKFDYAAVRAGTMMDPVLFPNDRVVVGTSGLSQFWQDLLKTLPAFALFTNI
>Mature_236_residues
AKFLSRRATTSAIAISFSIGLAGCGSPPVRVGLVNSTPVQEYGQGDYSASEQSEYLLRPSDVIAITVFREPDLSVESIPV
GADGTISLPMIGPVKVDGLTTRGVEELVASKLSSAALVNPSVNVNVLQFGSHVVTVEGSVEKPGMYSFKPGTRLSGAMAL
AGGSSRVAKLREVAVFRQTPRGIAVAKFDYAAVRAGTMMDPVLFPNDRVVVGTSGLSQFWQDLLKTLPAFALFTNI

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24953; Mature: 24822

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFLSRRATTSAIAISFSIGLAGCGSPPVRVGLVNSTPVQEYGQGDYSASEQSEYLLRP
CCHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECC
SDVIAITVFREPDLSVESIPVGADGTISLPMIGPVKVDGLTTRGVEELVASKLSSAALVN
CCEEEEEEEECCCCCEEEEECCCCCEEECCEECCEEECCCCCCCHHHHHHHHHCCCEEEC
PSVNVNVLQFGSHVVTVEGSVEKPGMYSFKPGTRLSGAMALAGGSSRVAKLREVAVFRQT
CCCCEEEEEECCEEEEEECCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCC
PRGIAVAKFDYAAVRAGTMMDPVLFPNDRVVVGTSGLSQFWQDLLKTLPAFALFTNI
CCCEEEEEECHHHHCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKFLSRRATTSAIAISFSIGLAGCGSPPVRVGLVNSTPVQEYGQGDYSASEQSEYLLRP
CHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECC
SDVIAITVFREPDLSVESIPVGADGTISLPMIGPVKVDGLTTRGVEELVASKLSSAALVN
CCEEEEEEEECCCCCEEEEECCCCCEEECCEECCEEECCCCCCCHHHHHHHHHCCCEEEC
PSVNVNVLQFGSHVVTVEGSVEKPGMYSFKPGTRLSGAMALAGGSSRVAKLREVAVFRQT
CCCCEEEEEECCEEEEEECCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCC
PRGIAVAKFDYAAVRAGTMMDPVLFPNDRVVVGTSGLSQFWQDLLKTLPAFALFTNI
CCCEEEEEECHHHHCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA