Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is exoP [H]
Identifier: 87201236
GI number: 87201236
Start: 3442033
End: 3444234
Strand: Direct
Name: exoP [H]
Synonym: Saro_3224
Alternate gene names: 87201236
Gene position: 3442033-3444234 (Clockwise)
Preceding gene: 87201235
Following gene: 87201237
Centisome position: 96.64
GC content: 64.85
Gene sequence:
>2202_bases ATGATAGACGCTCAAAATCGAGGTTCTTGGTCGGACCAGTACCTTCCGGGACACGAGGTTCCGCATGAAGAGACTACGGG CGGACTGATCAGCCTCGCAACGATCCGCGGGCTGCTCTTCCGCCAGCGGATCATTCTTATCGGCGTGACAGCAGCGGCGC TCGTGATCGGACTGACGATCACGCTGCTCATGCGCCCGGTCTACGAAGCCGGCGCCACCGTGCGCGTCGATCCGACCGGC GTGAACATTGTCGAAGGCCAGGATCTGGCCCCGACGCCGAACAGCAACGAAATCAACCGCTACATGAACACGCTCGGATC CGTGATCCAGAGCAAGAACATGGCTTATCGCGTCGTCGACGAACTCAAGCTCGACGCCAACGACGAGTTCCTTGGCGAAG CGTTTGCAAACGGCCGCCCGAACGGTACCACGGCCAAGCAGTGGGCTTACGCGCGCCGCGAGGCGGCAGCTGGCATCGCA CAGGGCGGCGTCTCGGTCGACATCCCGTCGGACAACCGGATCATCACCATCAAGTTCCGGTCGGGCAATCCCCGCTTCGC GAGCCTGGTGGCCAATGGCTATGCCGATGCCTTCGTGCAGGACGACATCCGCCGCGGGCTGGAAACCAACCTCTACGCGC GCAACTACCTGCAGGAGCAGATCCGCACGATCGGGACCAAGCTTCAGGCCGCCGAAATGAAGGCGAATGCCTACGCCAAG CAGAACCGCATCGTCGGCAGTTCGCTTGCGGCCCCCGCATCGGACAAGGAGGGCGGTGCTGCACCCGGGGGCACGATCAC CGTTGCCAACCTTGCCAGCATCAATTCCACCTACACCAAGCTGCGCGCCGACCGCATCGCGGCTGAGCAGCGCTGGCGCG CCATTGCCAACACGCCGGCAACCCAGCTTCCGGAAGTCCAGCAGAACGCAACCATCCAGGCCCTGCAAACCGATCGTTCC AAGCTGGTCACGCAGCTCGCCGAGATGCGCCAGCGCTATGGTTCGAACTATCCGCAGGTGCGTGAAGCGAAGGCGCAGGT GGACTCGCTCGACGCGCAGATCACGCGCATCTCGACCGAGATCAAGAACGGCATCCGCGACCAGTACCAGATCGCCCTGC GCCAGGAGCAGGGCCTGTCGGGCGAACTCCAGCAGGTGGCCGACGAGACTCTCGACGAACAGGACCGCCGCGTCCAGTAT AACATCCTCGACCGCGAGGCGAACGCCCTGCGCACGCAGCTTGCCACCCTGCTGGAACGCTACAACCAGCTTGCAGCGGC AGCGAACGTCGACAGCGGCGCGGTGACCAAGCTGGACGGCGCACCAACGCCGGGCCAGCCGGTCTCGCCCAACCTGGTCA AGAACATGCTCGCAGCCCTGCTGCTCGGCACCGGCCTTGCCATCGGCCTTGCGGTCCTGCGCGAAGCGTTCGACGACAGG CTGCGGTCGAGCGAGGATGTCGAGCGCAAGCTCGGCACGCCGATGCTCGGCTTCACGCCGCACCTCACGTCGGAGGAGAT CGCCGAACAGATCCAGGATCCGTTCAGCTCGCTCATGGAGGCCTATTCCTCACTGCGCACCTCGATCGACTTCGCGGTTG CCGGCGAGCATCGCGTCCTCCAGGTCACGAGCAGCCAGCCTTCGGAAGGCAAGTCGCTGACCTCGAGCGTCCTTGCACGC AAGTACGCGCAGCTTGGTCGCCGGACGCTGCTGATCGACGCCGACTTGCGCAAGCCGACGATCAACCACCTGTTCGGCAC CAAGCGCTCGTCGGTCGGCTTTGCCGAAGTGCTGCTGGGCGACGTGGAACTGGATCGCGCGCTGCTTGACGGCACGCCCG AGAACCTCGACGTGCTGCCGGTGGGTGCGATTCCGGCGAGCCCGGTCGAGTTGCTGTCCTCGCAGCGGCTGGCCGACTTC CTGGCCCGGTGCCGCGGCCTGTACGACCTCGTGATCGTCGACTCCTCGCCTGTGATGGGCCTTGCCGACGCTCCGCTGAT CTCGAACCACGTCGACGGGGTGATCTTCATCGTCGAGGCCAACCGTTCGCACTTCGGCCAGGCCAAGACGGCGCTGCGCC GCCTGCGCTCGGCGGGAGCGAACGTCGCCGGCGCCGTGCTGACCAAGTACCGGTCGGCGGAAGCGGGCCTCTCTTACGAC TACGTCTACAACTACTACTCCTACGGCAACGACCCCAAGTAA
Upstream 100 bases:
>100_bases TTCTGGCAGGACCTGCTCAAGACTCTACCGGCTTTCGCGCTGTTCACGAACATCTGACGCACAGCCCCTTGCCAAGACAT TCAACAGGACCGCTGCAAGC
Downstream 100 bases:
>100_bases GGGGCGAAGCCCAGACCACCACTGGCCGGCACCAGCGCGCACATGGATGGCGCCGGGTGCCGGCCGAAGTGCCCCAGGGC ACATCCGGAAGGCCAAGTGA
Product: protein-tyrosine kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MIDAQNRGSWSDQYLPGHEVPHEETTGGLISLATIRGLLFRQRIILIGVTAAALVIGLTITLLMRPVYEAGATVRVDPTG VNIVEGQDLAPTPNSNEINRYMNTLGSVIQSKNMAYRVVDELKLDANDEFLGEAFANGRPNGTTAKQWAYARREAAAGIA QGGVSVDIPSDNRIITIKFRSGNPRFASLVANGYADAFVQDDIRRGLETNLYARNYLQEQIRTIGTKLQAAEMKANAYAK QNRIVGSSLAAPASDKEGGAAPGGTITVANLASINSTYTKLRADRIAAEQRWRAIANTPATQLPEVQQNATIQALQTDRS KLVTQLAEMRQRYGSNYPQVREAKAQVDSLDAQITRISTEIKNGIRDQYQIALRQEQGLSGELQQVADETLDEQDRRVQY NILDREANALRTQLATLLERYNQLAAAANVDSGAVTKLDGAPTPGQPVSPNLVKNMLAALLLGTGLAIGLAVLREAFDDR LRSSEDVERKLGTPMLGFTPHLTSEEIAEQIQDPFSSLMEAYSSLRTSIDFAVAGEHRVLQVTSSQPSEGKSLTSSVLAR KYAQLGRRTLLIDADLRKPTINHLFGTKRSSVGFAEVLLGDVELDRALLDGTPENLDVLPVGAIPASPVELLSSQRLADF LARCRGLYDLVIVDSSPVMGLADAPLISNHVDGVIFIVEANRSHFGQAKTALRRLRSAGANVAGAVLTKYRSAEAGLSYD YVYNYYSYGNDPK
Sequences:
>Translated_733_residues MIDAQNRGSWSDQYLPGHEVPHEETTGGLISLATIRGLLFRQRIILIGVTAAALVIGLTITLLMRPVYEAGATVRVDPTG VNIVEGQDLAPTPNSNEINRYMNTLGSVIQSKNMAYRVVDELKLDANDEFLGEAFANGRPNGTTAKQWAYARREAAAGIA QGGVSVDIPSDNRIITIKFRSGNPRFASLVANGYADAFVQDDIRRGLETNLYARNYLQEQIRTIGTKLQAAEMKANAYAK QNRIVGSSLAAPASDKEGGAAPGGTITVANLASINSTYTKLRADRIAAEQRWRAIANTPATQLPEVQQNATIQALQTDRS KLVTQLAEMRQRYGSNYPQVREAKAQVDSLDAQITRISTEIKNGIRDQYQIALRQEQGLSGELQQVADETLDEQDRRVQY NILDREANALRTQLATLLERYNQLAAAANVDSGAVTKLDGAPTPGQPVSPNLVKNMLAALLLGTGLAIGLAVLREAFDDR LRSSEDVERKLGTPMLGFTPHLTSEEIAEQIQDPFSSLMEAYSSLRTSIDFAVAGEHRVLQVTSSQPSEGKSLTSSVLAR KYAQLGRRTLLIDADLRKPTINHLFGTKRSSVGFAEVLLGDVELDRALLDGTPENLDVLPVGAIPASPVELLSSQRLADF LARCRGLYDLVIVDSSPVMGLADAPLISNHVDGVIFIVEANRSHFGQAKTALRRLRSAGANVAGAVLTKYRSAEAGLSYD YVYNYYSYGNDPK >Mature_733_residues MIDAQNRGSWSDQYLPGHEVPHEETTGGLISLATIRGLLFRQRIILIGVTAAALVIGLTITLLMRPVYEAGATVRVDPTG VNIVEGQDLAPTPNSNEINRYMNTLGSVIQSKNMAYRVVDELKLDANDEFLGEAFANGRPNGTTAKQWAYARREAAAGIA QGGVSVDIPSDNRIITIKFRSGNPRFASLVANGYADAFVQDDIRRGLETNLYARNYLQEQIRTIGTKLQAAEMKANAYAK QNRIVGSSLAAPASDKEGGAAPGGTITVANLASINSTYTKLRADRIAAEQRWRAIANTPATQLPEVQQNATIQALQTDRS KLVTQLAEMRQRYGSNYPQVREAKAQVDSLDAQITRISTEIKNGIRDQYQIALRQEQGLSGELQQVADETLDEQDRRVQY NILDREANALRTQLATLLERYNQLAAAANVDSGAVTKLDGAPTPGQPVSPNLVKNMLAALLLGTGLAIGLAVLREAFDDR LRSSEDVERKLGTPMLGFTPHLTSEEIAEQIQDPFSSLMEAYSSLRTSIDFAVAGEHRVLQVTSSQPSEGKSLTSSVLAR KYAQLGRRTLLIDADLRKPTINHLFGTKRSSVGFAEVLLGDVELDRALLDGTPENLDVLPVGAIPASPVELLSSQRLADF LARCRGLYDLVIVDSSPVMGLADAPLISNHVDGVIFIVEANRSHFGQAKTALRRLRSAGANVAGAVLTKYRSAEAGLSYD YVYNYYSYGNDPK
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=493, Percent_Identity=26.9776876267748, Blast_Score=137, Evalue=4e-33, Organism=Escherichia coli, GI1787216, Length=328, Percent_Identity=28.9634146341463, Blast_Score=130, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 79639; Mature: 79639
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAQNRGSWSDQYLPGHEVPHEETTGGLISLATIRGLLFRQRIILIGVTAAALVIGLTI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH TLLMRPVYEAGATVRVDPTGVNIVEGQDLAPTPNSNEINRYMNTLGSVIQSKNMAYRVVD HHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ELKLDANDEFLGEAFANGRPNGTTAKQWAYARREAAAGIAQGGVSVDIPSDNRIITIKFR HHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEE SGNPRFASLVANGYADAFVQDDIRRGLETNLYARNYLQEQIRTIGTKLQAAEMKANAYAK CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNRIVGSSLAAPASDKEGGAAPGGTITVANLASINSTYTKLRADRIAAEQRWRAIANTPA HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TQLPEVQQNATIQALQTDRSKLVTQLAEMRQRYGSNYPQVREAKAQVDSLDAQITRISTE CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IKNGIRDQYQIALRQEQGLSGELQQVADETLDEQDRRVQYNILDREANALRTQLATLLER HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCEEEEEEHHHHHHHHHHHHHHHHHH YNQLAAAANVDSGAVTKLDGAPTPGQPVSPNLVKNMLAALLLGTGLAIGLAVLREAFDDR HHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSSEDVERKLGTPMLGFTPHLTSEEIAEQIQDPFSSLMEAYSSLRTSIDFAVAGEHRVL HCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEE QVTSSQPSEGKSLTSSVLARKYAQLGRRTLLIDADLRKPTINHLFGTKRSSVGFAEVLLG EEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHH DVELDRALLDGTPENLDVLPVGAIPASPVELLSSQRLADFLARCRGLYDLVIVDSSPVMG HHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC LADAPLISNHVDGVIFIVEANRSHFGQAKTALRRLRSAGANVAGAVLTKYRSAEAGLSYD CCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH YVYNYYSYGNDPK HHHHHHCCCCCCC >Mature Secondary Structure MIDAQNRGSWSDQYLPGHEVPHEETTGGLISLATIRGLLFRQRIILIGVTAAALVIGLTI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH TLLMRPVYEAGATVRVDPTGVNIVEGQDLAPTPNSNEINRYMNTLGSVIQSKNMAYRVVD HHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ELKLDANDEFLGEAFANGRPNGTTAKQWAYARREAAAGIAQGGVSVDIPSDNRIITIKFR HHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEE SGNPRFASLVANGYADAFVQDDIRRGLETNLYARNYLQEQIRTIGTKLQAAEMKANAYAK CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNRIVGSSLAAPASDKEGGAAPGGTITVANLASINSTYTKLRADRIAAEQRWRAIANTPA HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TQLPEVQQNATIQALQTDRSKLVTQLAEMRQRYGSNYPQVREAKAQVDSLDAQITRISTE CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IKNGIRDQYQIALRQEQGLSGELQQVADETLDEQDRRVQYNILDREANALRTQLATLLER HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCEEEEEEHHHHHHHHHHHHHHHHHH YNQLAAAANVDSGAVTKLDGAPTPGQPVSPNLVKNMLAALLLGTGLAIGLAVLREAFDDR HHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSSEDVERKLGTPMLGFTPHLTSEEIAEQIQDPFSSLMEAYSSLRTSIDFAVAGEHRVL HCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEE QVTSSQPSEGKSLTSSVLARKYAQLGRRTLLIDADLRKPTINHLFGTKRSSVGFAEVLLG EEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHH DVELDRALLDGTPENLDVLPVGAIPASPVELLSSQRLADFLARCRGLYDLVIVDSSPVMG HHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC LADAPLISNHVDGVIFIVEANRSHFGQAKTALRRLRSAGANVAGAVLTKYRSAEAGLSYD CCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH YVYNYYSYGNDPK HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]