Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87201233
Identifier: 87201233
GI number: 87201233
Start: 3439260
End: 3440513
Strand: Direct
Name: 87201233
Synonym: Saro_3221
Alternate gene names: NA
Gene position: 3439260-3440513 (Clockwise)
Preceding gene: 87201232
Following gene: 87201235
Centisome position: 96.57
GC content: 61.16
Gene sequence:
>1254_bases ATGAACGCGCCGGTTCCCGCAGCTGACTTCGAGTTCCCCACCGAAATCCCCGGCCTGCCGCTGGCGGGCAGGAAAGTCCT GATCGTCGTCGAGAACCTGCCGCTGCCCTTCGACCGGCGTGTCTGGCAGGAAGCGCGCACACTGAAGGCCGCCGGGGCGC AAGTCTCGATCATTTGCCCCACGGGCAAAGGTTACGAGAAGCGCTTCGAAGTCATCGACGGCATCGACATCCACCGCCAT CCCCTGCCCATCGAGGCGAGCGGCGCACTGGGGTTCCTGCTGGAATATGGCGCGGCCCTGTTCTGGGAAACGGTGCTGGC TTGGAAGATATTCCTCAAGCGCGGCATCGACGTGATCCAGGGGTGCAATCCGCCCGACCTGATCTTCCTTGTCGCCCTGC CCTTCAAGCTTCTGGGCGTCAAATATATCTTCGACCATCACGACATCAATCCCGAGCTTTACGAAGCGAAGTTCGACAAG CGGGGCTTCTTCTGGAAGTTGATGGTCCTGTTCGAAAAGTTGACGTTCAAGGCCGCCGACGTGTCGATGGCCACCAATCA TTCCTATCGCAAGATCGCCATCGAGCGGGGCGGCATGGACCCGGATAAGGTGTTCGTCGTCCGCTCAGGTCCGGATCTCA GCCGGCTGAAGCGGGTACCTCCGGTCGAAAGCTGGAAGAACGGGCGCAAGCACCTCGTCGGATATGTCGGGGTGATGGGC GACCAGGAGGGAATAGACCTTCTAATCGATGCGGTGGACCATATCGTGCGCGTGATGGGCCGAGACGACATCCAGTTCTG CCTTGTCGGCGGAGGGCCAAGCCTCGCCAAGCTAAAGGCACTGGTCGCGGAAAAGGGCTTGGCCGACTTCATCCAGTTCA CCGGCCGCGCACCCGATCAGGACCTGTTCGAAGTTCTTTCGACGATGGACGTCGGGGTCAATCCGGACCGCGTCAACGCG ATGAACGACAAGTCCACCATGAACAAGATCATGGAGTACATGAGCCTCGAGAAGCCCATCGTGCAGTTCGACGTGACCGA GGGGCGCTTTTCCGCGCAGGAAGCCTCGCTCTATGCGCGCGCGAACGATCCGGTCGACATGGCGGAAAAGATCGTCGAGC TGATCGGAGATCCGGAACGACGGGCCCGCATGGGCGCACTCGGCCGCATGCGCGTGGAGACCGAACTGAATTGGGGGCAC CAGATCGCCCCGTTGATCGCCGCGTATCGCAAGGCGCTCTGCCTTGCCGACTGA
Upstream 100 bases:
>100_bases CCGCGGAAGCGCGCGACTACGGCGTGGTGATTGCGACCAATCGCCTCATTCGCGACCTCGCGCTTCCGGGCCGCCGTATC GTCGACGTGAGCGCCATTGC
Downstream 100 bases:
>100_bases GTCCGTCCCCGCCCCTGGGCGCCGGTCCGGCTCAGCCTCGCGGTGCCCTGAGGAGGTTGCGGTAGCGAAGCGCCGCGTAG GCGACCGCGAACGTGGCACC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Transposase; LPS Biosynthesis Rfbu Related Protein; Glycosyl Transferase Family Protein; Membrane-Anchored Group 1 Glycosyltransferase; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNAPVPAADFEFPTEIPGLPLAGRKVLIVVENLPLPFDRRVWQEARTLKAAGAQVSIICPTGKGYEKRFEVIDGIDIHRH PLPIEASGALGFLLEYGAALFWETVLAWKIFLKRGIDVIQGCNPPDLIFLVALPFKLLGVKYIFDHHDINPELYEAKFDK RGFFWKLMVLFEKLTFKAADVSMATNHSYRKIAIERGGMDPDKVFVVRSGPDLSRLKRVPPVESWKNGRKHLVGYVGVMG DQEGIDLLIDAVDHIVRVMGRDDIQFCLVGGGPSLAKLKALVAEKGLADFIQFTGRAPDQDLFEVLSTMDVGVNPDRVNA MNDKSTMNKIMEYMSLEKPIVQFDVTEGRFSAQEASLYARANDPVDMAEKIVELIGDPERRARMGALGRMRVETELNWGH QIAPLIAAYRKALCLAD
Sequences:
>Translated_417_residues MNAPVPAADFEFPTEIPGLPLAGRKVLIVVENLPLPFDRRVWQEARTLKAAGAQVSIICPTGKGYEKRFEVIDGIDIHRH PLPIEASGALGFLLEYGAALFWETVLAWKIFLKRGIDVIQGCNPPDLIFLVALPFKLLGVKYIFDHHDINPELYEAKFDK RGFFWKLMVLFEKLTFKAADVSMATNHSYRKIAIERGGMDPDKVFVVRSGPDLSRLKRVPPVESWKNGRKHLVGYVGVMG DQEGIDLLIDAVDHIVRVMGRDDIQFCLVGGGPSLAKLKALVAEKGLADFIQFTGRAPDQDLFEVLSTMDVGVNPDRVNA MNDKSTMNKIMEYMSLEKPIVQFDVTEGRFSAQEASLYARANDPVDMAEKIVELIGDPERRARMGALGRMRVETELNWGH QIAPLIAAYRKALCLAD >Mature_417_residues MNAPVPAADFEFPTEIPGLPLAGRKVLIVVENLPLPFDRRVWQEARTLKAAGAQVSIICPTGKGYEKRFEVIDGIDIHRH PLPIEASGALGFLLEYGAALFWETVLAWKIFLKRGIDVIQGCNPPDLIFLVALPFKLLGVKYIFDHHDINPELYEAKFDK RGFFWKLMVLFEKLTFKAADVSMATNHSYRKIAIERGGMDPDKVFVVRSGPDLSRLKRVPPVESWKNGRKHLVGYVGVMG DQEGIDLLIDAVDHIVRVMGRDDIQFCLVGGGPSLAKLKALVAEKGLADFIQFTGRAPDQDLFEVLSTMDVGVNPDRVNA MNDKSTMNKIMEYMSLEKPIVQFDVTEGRFSAQEASLYARANDPVDMAEKIVELIGDPERRARMGALGRMRVETELNWGH QIAPLIAAYRKALCLAD
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46576; Mature: 46576
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVPAADFEFPTEIPGLPLAGRKVLIVVENLPLPFDRRVWQEARTLKAAGAQVSIICP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEC TGKGYEKRFEVIDGIDIHRHPLPIEASGALGFLLEYGAALFWETVLAWKIFLKRGIDVIQ CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GCNPPDLIFLVALPFKLLGVKYIFDHHDINPELYEAKFDKRGFFWKLMVLFEKLTFKAAD CCCCCCEEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC VSMATNHSYRKIAIERGGMDPDKVFVVRSGPDLSRLKRVPPVESWKNGRKHLVGYVGVMG EEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCHHHHHCCHHHEEEEEEECC DQEGIDLLIDAVDHIVRVMGRDDIQFCLVGGGPSLAKLKALVAEKGLADFIQFTGRAPDQ CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCCCH DLFEVLSTMDVGVNPDRVNAMNDKSTMNKIMEYMSLEKPIVQFDVTEGRFSAQEASLYAR HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHEEEC ANDPVDMAEKIVELIGDPERRARMGALGRMRVETELNWGHQIAPLIAAYRKALCLAD CCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAPVPAADFEFPTEIPGLPLAGRKVLIVVENLPLPFDRRVWQEARTLKAAGAQVSIICP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEC TGKGYEKRFEVIDGIDIHRHPLPIEASGALGFLLEYGAALFWETVLAWKIFLKRGIDVIQ CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GCNPPDLIFLVALPFKLLGVKYIFDHHDINPELYEAKFDKRGFFWKLMVLFEKLTFKAAD CCCCCCEEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC VSMATNHSYRKIAIERGGMDPDKVFVVRSGPDLSRLKRVPPVESWKNGRKHLVGYVGVMG EEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCHHHHHCCHHHEEEEEEECC DQEGIDLLIDAVDHIVRVMGRDDIQFCLVGGGPSLAKLKALVAEKGLADFIQFTGRAPDQ CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCCCH DLFEVLSTMDVGVNPDRVNAMNDKSTMNKIMEYMSLEKPIVQFDVTEGRFSAQEASLYAR HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHEEEC ANDPVDMAEKIVELIGDPERRARMGALGRMRVETELNWGHQIAPLIAAYRKALCLAD CCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA