| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is katG
Identifier: 87200921
GI number: 87200921
Start: 3126810
End: 3129053
Strand: Direct
Name: katG
Synonym: Saro_2909
Alternate gene names: 87200921
Gene position: 3126810-3129053 (Clockwise)
Preceding gene: 87200920
Following gene: 87200923
Centisome position: 87.79
GC content: 66.31
Gene sequence:
>2244_bases ATGCGAAAGTTTTCAGTTTCCAAGGTCGCCTTGCTGGCGGCAACGATGGCCCCTGCCCTGCTGCCTGCCGCAGCACGCGC CGAAGGCACCGCCGCGCCCGCCGCAACCGCGCCTGCCACCCCCATGTCGAACAGGGACTGGTGGCCCAATCGCCTCGACC TTTCGCCGCTTCGCCAGCACGGCGTTGAATCGAACCCGATGGGCGGCAAGTTCAACTATGCCGAGGAATTCAAGACTCTC GACCTCGCCGCGGTGAAGAAGGACATCGAGGCGCTGATGACGACCTCGCAGGACTGGTGGCCGGCCGACTACGGCCACTA CGGTCCGTTCTTCATCCGGATGGCATGGCACAGCGCCGGCACCTATCGCACCGCCGACGGGCGCGGCGGTGCCGGCGGCG GCCAGCAGCGCTTCGAACCGCTCAACTCCTGGCCCGACAACGTCAACCTCGACAAGGCCCGCCGTCTGCTCTGGCCGATC AAGCAGAAGTACGGTCGCAAGATCTCGTGGGCGGACCTCATGGTGTTGACTGGCAACGTCGCGCTCGAATCGATGGGCTT CAAGACCTTCGGGTTCGCGGGTGGCCGCGCCGACGACTGGGAGGCCGATCAGGTCTTCTGGGGGCCAGAGAACAAGTGGC TGGCCGACCAGCGCTACCACGGCGACCGGAAGCTCCAGAACCCGCTCGCAGCGGTGCAAATGGGCCTCATCTACGTCAAT CCGGAAGGCCCGAACGGCAATCCCGACCCGCTGCTCGCGGCAAAGGACATCCGCGAGACGTTCGGCCGCATGGCCATGAA CGACGAAGAGACCGTCGCCCTGATCGCCGGGGGCCACACCTTCGGCAAGGCGCACGGCGCGCGCAAGCCGGAAGGCTGCG TGGGCGTCGATCCGGCGGCCGGAGCCGTCGAGGACCAGGGTCTGGGCTGGAACAACAAGTGCGGCAAGGGCAATGCCGAA GATACCGTGAGCAGCGGCCTCGAAGGCGCGTGGACCGCCAACCCGATCGCCTGGACCACGCAGTACCTCGACAACCTCTA TGCGTTCGAATGGGTCCAGACCCGCAGCCCGGCTGGCGCGATCCAGTGGGTGCCCAAGGAGGACGCGACCTTCGTCCCCG ACGCACACGTCAAGGACAAGTTGCACAAGCCGATCATGTTCACCACCGATCTCGCGCTGAAGACGGACCCGGCCTATCGC AAGATCACCACGAAGTTCCGCCAGAACCCCGACGCCTTCGCCGATGCCTTCGCCCGCGCATGGTTCAAGCTGACCCACCG CGACATGGGCCCGCGCTGGCGCTATCTCGGCGCGATGGTGCCTGCCGAGGAACTGATCTGGCAGGACCCCGTCCCCAAGG CCACCTACGCCATGATCGACGCGGCCGACGTCTCGGCGCTCAAGGGGCGCATCCTCGCCACCGGGCTCACCGGGCCTGAA CTGGTGCGCGCGGCCTGGGCCTCGGCGGCAAGCTTCCGCGGCACCGACATGCGCGGCGGCACCGATGGCGGACGCATCCG CCTCGCTCCGCAGAAGGACTGGGCGGCCAACAATCCGGCGGAACTCGCAAGGGTCCTGAAGGCGCTCGAAGGCGTCGCGA CCGAGTTCAACCGCGCCGCAAAGGACGGCAAGAAGGTCTCCGTGGCCAATCTCGTCGTGCTGGGCGGCAATGCCGCAATA GAACAGGCCGCGGCAAAGGCCGGCGTCACGGTCGAGGTGCCGTTCACGCCCGGCCGCACCGACGCGAGCCAAGCCCAGAC CGATGTCGCGTCGTTCGAGTTCCTGAAGCCTGCCGCCGATGGCTTCCGCAACTATTACGATGCGTCCGCCAACCGCCTTT CGCCTTCGGAAATGCTGGTCGAACGCGCAAATCTGCTGACGCTTTCGGTGCCGGAAATGACCGTGCTGGTCGGCGGCTTG CGCGCGCTCGATGCCAATGCCGGCGGGGCCAGGCACGGGGTCTTCACCGATCGTCCGGGCACGCTCAGCAACGACTTCTT CGTCAACCTGCTGGGCATGGAGACGAAGTGGCAGAAGGCGGCGACCGACGGCGTCTATGAAGGGCTTGATCGCAAGACCG GCAAGACCAGGTGGACGGCCACCCCCGTCGACCTCGTGTTCGGTTCCAACTCCGAACTGCGGGCGGTCTCTGAAGTCTAC GGGTCGGCCGATGCCAACGCGAAGTTCGTCAACGACTTCGTCGCGGCCTGGACCAAGGTCATGAACCTCGGTCGCCCGTC ATAA
Upstream 100 bases:
>100_bases GATAACTGTAAGGGGAAAAATCGGTTTTCCCTTTCCTTTCTGCAGGATTAATCGATTTTCCAGCGGATCCGCATGGTTTC ATCCCGATGGAGAGGCATCC
Downstream 100 bases:
>100_bases GCCGGAAAGTGAAGGGCGGTTCCGCAAAGGAGCCGCCCTCTTCGGGTCAGGCGAAGAGCGCGCTGGCCCGCAGCAGGTTG TAGGCCTCGACCACTTCCTG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MRKFSVSKVALLAATMAPALLPAAARAEGTAAPAATAPATPMSNRDWWPNRLDLSPLRQHGVESNPMGGKFNYAEEFKTL DLAAVKKDIEALMTTSQDWWPADYGHYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPI KQKYGRKISWADLMVLTGNVALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVN PEGPNGNPDPLLAAKDIRETFGRMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAAGAVEDQGLGWNNKCGKGNAE DTVSSGLEGAWTANPIAWTTQYLDNLYAFEWVQTRSPAGAIQWVPKEDATFVPDAHVKDKLHKPIMFTTDLALKTDPAYR KITTKFRQNPDAFADAFARAWFKLTHRDMGPRWRYLGAMVPAEELIWQDPVPKATYAMIDAADVSALKGRILATGLTGPE LVRAAWASAASFRGTDMRGGTDGGRIRLAPQKDWAANNPAELARVLKALEGVATEFNRAAKDGKKVSVANLVVLGGNAAI EQAAAKAGVTVEVPFTPGRTDASQAQTDVASFEFLKPAADGFRNYYDASANRLSPSEMLVERANLLTLSVPEMTVLVGGL RALDANAGGARHGVFTDRPGTLSNDFFVNLLGMETKWQKAATDGVYEGLDRKTGKTRWTATPVDLVFGSNSELRAVSEVY GSADANAKFVNDFVAAWTKVMNLGRPS
Sequences:
>Translated_747_residues MRKFSVSKVALLAATMAPALLPAAARAEGTAAPAATAPATPMSNRDWWPNRLDLSPLRQHGVESNPMGGKFNYAEEFKTL DLAAVKKDIEALMTTSQDWWPADYGHYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPI KQKYGRKISWADLMVLTGNVALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVN PEGPNGNPDPLLAAKDIRETFGRMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAAGAVEDQGLGWNNKCGKGNAE DTVSSGLEGAWTANPIAWTTQYLDNLYAFEWVQTRSPAGAIQWVPKEDATFVPDAHVKDKLHKPIMFTTDLALKTDPAYR KITTKFRQNPDAFADAFARAWFKLTHRDMGPRWRYLGAMVPAEELIWQDPVPKATYAMIDAADVSALKGRILATGLTGPE LVRAAWASAASFRGTDMRGGTDGGRIRLAPQKDWAANNPAELARVLKALEGVATEFNRAAKDGKKVSVANLVVLGGNAAI EQAAAKAGVTVEVPFTPGRTDASQAQTDVASFEFLKPAADGFRNYYDASANRLSPSEMLVERANLLTLSVPEMTVLVGGL RALDANAGGARHGVFTDRPGTLSNDFFVNLLGMETKWQKAATDGVYEGLDRKTGKTRWTATPVDLVFGSNSELRAVSEVY GSADANAKFVNDFVAAWTKVMNLGRPS >Mature_747_residues MRKFSVSKVALLAATMAPALLPAAARAEGTAAPAATAPATPMSNRDWWPNRLDLSPLRQHGVESNPMGGKFNYAEEFKTL DLAAVKKDIEALMTTSQDWWPADYGHYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPI KQKYGRKISWADLMVLTGNVALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVN PEGPNGNPDPLLAAKDIRETFGRMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAAGAVEDQGLGWNNKCGKGNAE DTVSSGLEGAWTANPIAWTTQYLDNLYAFEWVQTRSPAGAIQWVPKEDATFVPDAHVKDKLHKPIMFTTDLALKTDPAYR KITTKFRQNPDAFADAFARAWFKLTHRDMGPRWRYLGAMVPAEELIWQDPVPKATYAMIDAADVSALKGRILATGLTGPE LVRAAWASAASFRGTDMRGGTDGGRIRLAPQKDWAANNPAELARVLKALEGVATEFNRAAKDGKKVSVANLVVLGGNAAI EQAAAKAGVTVEVPFTPGRTDASQAQTDVASFEFLKPAADGFRNYYDASANRLSPSEMLVERANLLTLSVPEMTVLVGGL RALDANAGGARHGVFTDRPGTLSNDFFVNLLGMETKWQKAATDGVYEGLDRKTGKTRWTATPVDLVFGSNSELRAVSEVY GSADANAKFVNDFVAAWTKVMNLGRPS
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=707, Percent_Identity=56.2942008486563, Blast_Score=761, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_NOVAD (Q2G479)
Other databases:
- EMBL: CP000248 - RefSeq: YP_498178.1 - HSSP: Q50555 - ProteinModelPortal: Q2G479 - SMR: Q2G479 - STRING: Q2G479 - GeneID: 3915548 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2909 - NMPDR: fig|48935.1.peg.3532 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: KNKCGKG - PhylomeDB: Q2G479 - ProtClustDB: PRK15061 - BioCyc: NARO279238:SARO_2909-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 81101; Mature: 81101
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 117-117
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFSVSKVALLAATMAPALLPAAARAEGTAAPAATAPATPMSNRDWWPNRLDLSPLRQH CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC GVESNPMGGKFNYAEEFKTLDLAAVKKDIEALMTTSQDWWPADYGHYGPFFIRMAWHSAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC TYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMVLTGNV CEEECCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC ALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVN HHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCHHHHCHHHHEEEEEEEEC PEGPNGNPDPLLAAKDIRETFGRMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAA CCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCC GAVEDQGLGWNNKCGKGNAEDTVSSGLEGAWTANPIAWTTQYLDNLYAFEWVQTRSPAGA CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC IQWVPKEDATFVPDAHVKDKLHKPIMFTTDLALKTDPAYRKITTKFRQNPDAFADAFARA EEECCCCCCCCCCCCHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHCCCHHHHHHHHHH WFKLTHRDMGPRWRYLGAMVPAEELIWQDPVPKATYAMIDAADVSALKGRILATGLTGPE HHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHEEEHHHHHHHCCEEEEECCCCHH LVRAAWASAASFRGTDMRGGTDGGRIRLAPQKDWAANNPAELARVLKALEGVATEFNRAA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KDGKKVSVANLVVLGGNAAIEQAAAKAGVTVEVPFTPGRTDASQAQTDVASFEFLKPAAD CCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH GFRNYYDASANRLSPSEMLVERANLLTLSVPEMTVLVGGLRALDANAGGARHGVFTDRPG HHHHHHCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHCHHEECCCCCCCCCCCCCCCCC TLSNDFFVNLLGMETKWQKAATDGVYEGLDRKTGKTRWTATPVDLVFGSNSELRAVSEVY CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHH GSADANAKFVNDFVAAWTKVMNLGRPS CCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKFSVSKVALLAATMAPALLPAAARAEGTAAPAATAPATPMSNRDWWPNRLDLSPLRQH CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC GVESNPMGGKFNYAEEFKTLDLAAVKKDIEALMTTSQDWWPADYGHYGPFFIRMAWHSAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC TYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMVLTGNV CEEECCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC ALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVN HHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCHHHHCHHHHEEEEEEEEC PEGPNGNPDPLLAAKDIRETFGRMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAA CCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCC GAVEDQGLGWNNKCGKGNAEDTVSSGLEGAWTANPIAWTTQYLDNLYAFEWVQTRSPAGA CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC IQWVPKEDATFVPDAHVKDKLHKPIMFTTDLALKTDPAYRKITTKFRQNPDAFADAFARA EEECCCCCCCCCCCCHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHCCCHHHHHHHHHH WFKLTHRDMGPRWRYLGAMVPAEELIWQDPVPKATYAMIDAADVSALKGRILATGLTGPE HHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHEEEHHHHHHHCCEEEEECCCCHH LVRAAWASAASFRGTDMRGGTDGGRIRLAPQKDWAANNPAELARVLKALEGVATEFNRAA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KDGKKVSVANLVVLGGNAAIEQAAAKAGVTVEVPFTPGRTDASQAQTDVASFEFLKPAAD CCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH GFRNYYDASANRLSPSEMLVERANLLTLSVPEMTVLVGGLRALDANAGGARHGVFTDRPG HHHHHHCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHCHHEECCCCCCCCCCCCCCCCC TLSNDFFVNLLGMETKWQKAATDGVYEGLDRKTGKTRWTATPVDLVFGSNSELRAVSEVY CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHH GSADANAKFVNDFVAAWTKVMNLGRPS CCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA