Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is suhB [H]
Identifier: 87199974
GI number: 87199974
Start: 2075694
End: 2076518
Strand: Reverse
Name: suhB [H]
Synonym: Saro_1957
Alternate gene names: 87199974
Gene position: 2076518-2075694 (Counterclockwise)
Preceding gene: 87199975
Following gene: 87199973
Centisome position: 58.3
GC content: 65.94
Gene sequence:
>825_bases ATGGCAGCTATTTCCGGCCTCATTCGCGTGATGGAGCGCGCGGCGCGCAAGGCGGGTGGACGCCTGCGCCGCGACTTCGG CGAGATCGAACATCTCCAGGTCTCCAAGAAGGGGCCGGCCGACTTCGTCTCGAAGGCCGACCGCCAGGCCGAACGCACCC TGTGGGACGAACTGCGCGCGGCGCGTCCGGGTTGGGGCTTCCTGATGGAAGAGGGTGGCGAGATCGAGGGTGAGCCGGGC AAGCCGCGCTTCATCATCGATCCGCTAGACGGCACCAGCAACTTTCTCCATGGCATCCCGCATTTCGCGATCTCCATCGC TGTGCAGGAACCGACGCTCGACGGGAAGGGCTGGGGTGAAGTCACTGCGGCGCTGGTCTATCAGCCGATCACCGACGAAA GCTTCTGGGCCGAAAAGAGCCAGGGCGCCTGGCTCCAGGACCGTCGTCTGCGGGTTTCCGCGCGCCGCCACCTTGACGAA GCGCTGATCGCCACCGGCATTCCGTTCGCGGGCCGTGGGGACATGGGCGAGTGGATCCGTATCTACGCAGAACTTGGTCC GCGCATCGCCGGCATTCGCCGGAACGGTGCGGCCTCGCTGGATCTGGCATGGGTCGCGGCCGGCCGCTTCGACGGCTTCT GGGAAAGCAGCCTTGCTCCCTGGGACACGGCCGCAGGATGCCTCCTCGTGCGAGAGGCGGGCGGCTTCGTGTCTGACTAC AAGGGGCGGTCGCACCCGATCTGCGATGAAACCGTCCTTGCGGGCAACGACGCGCTGCATTCGAAGCTTCACAAGCTCCT TGTTGGCGCCTTGCGCAACGCATGA
Upstream 100 bases:
>100_bases TAACGGCGTGCGCGTGATGGTTCCGCCGCACATCGAAAGCGGCACCCGCATCGTCGTCGACGTCTACGAGCGCAGCTACG TAGGCAAGGCGAACTGATCG
Downstream 100 bases:
>100_bases TCTTGGGTTGGGCCCGACCTCGGGCTTGACCTTTTCGGCGGGCGCTGGCTAAGGCCGGTGCCCGCGTGCCCCTGTGGCGG AATGGTAGACGCGAACGACT
Product: inositol-1(or 4)-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAAISGLIRVMERAARKAGGRLRRDFGEIEHLQVSKKGPADFVSKADRQAERTLWDELRAARPGWGFLMEEGGEIEGEPG KPRFIIDPLDGTSNFLHGIPHFAISIAVQEPTLDGKGWGEVTAALVYQPITDESFWAEKSQGAWLQDRRLRVSARRHLDE ALIATGIPFAGRGDMGEWIRIYAELGPRIAGIRRNGAASLDLAWVAAGRFDGFWESSLAPWDTAAGCLLVREAGGFVSDY KGRSHPICDETVLAGNDALHSKLHKLLVGALRNA
Sequences:
>Translated_274_residues MAAISGLIRVMERAARKAGGRLRRDFGEIEHLQVSKKGPADFVSKADRQAERTLWDELRAARPGWGFLMEEGGEIEGEPG KPRFIIDPLDGTSNFLHGIPHFAISIAVQEPTLDGKGWGEVTAALVYQPITDESFWAEKSQGAWLQDRRLRVSARRHLDE ALIATGIPFAGRGDMGEWIRIYAELGPRIAGIRRNGAASLDLAWVAAGRFDGFWESSLAPWDTAAGCLLVREAGGFVSDY KGRSHPICDETVLAGNDALHSKLHKLLVGALRNA >Mature_273_residues AAISGLIRVMERAARKAGGRLRRDFGEIEHLQVSKKGPADFVSKADRQAERTLWDELRAARPGWGFLMEEGGEIEGEPGK PRFIIDPLDGTSNFLHGIPHFAISIAVQEPTLDGKGWGEVTAALVYQPITDESFWAEKSQGAWLQDRRLRVSARRHLDEA LIATGIPFAGRGDMGEWIRIYAELGPRIAGIRRNGAASLDLAWVAAGRFDGFWESSLAPWDTAAGCLLVREAGGFVSDYK GRSHPICDETVLAGNDALHSKLHKLLVGALRNA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=232, Percent_Identity=28.8793103448276, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI221625487, Length=232, Percent_Identity=28.8793103448276, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI7657236, Length=238, Percent_Identity=31.0924369747899, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1788882, Length=250, Percent_Identity=44.8, Blast_Score=209, Evalue=2e-55, Organism=Caenorhabditis elegans, GI193202570, Length=255, Percent_Identity=30.9803921568627, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193202572, Length=255, Percent_Identity=29.0196078431373, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6320493, Length=213, Percent_Identity=30.9859154929577, Blast_Score=112, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6321836, Length=247, Percent_Identity=25.1012145748988, Blast_Score=89, Evalue=6e-19, Organism=Drosophila melanogaster, GI21357329, Length=239, Percent_Identity=33.4728033472803, Blast_Score=121, Evalue=4e-28, Organism=Drosophila melanogaster, GI24664926, Length=263, Percent_Identity=30.4182509505703, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24664922, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24664918, Length=235, Percent_Identity=30.6382978723404, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI21357957, Length=275, Percent_Identity=29.8181818181818, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI21357303, Length=235, Percent_Identity=28.936170212766, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30006; Mature: 29875
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAISGLIRVMERAARKAGGRLRRDFGEIEHLQVSKKGPADFVSKADRQAERTLWDELRA CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH ARPGWGFLMEEGGEIEGEPGKPRFIIDPLDGTSNFLHGIPHFAISIAVQEPTLDGKGWGE CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHH VTAALVYQPITDESFWAEKSQGAWLQDRRLRVSARRHLDEALIATGIPFAGRGDMGEWIR HHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IYAELGPRIAGIRRNGAASLDLAWVAAGRFDGFWESSLAPWDTAAGCLLVREAGGFVSDY HHHHHCCCEECEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHC KGRSHPICDETVLAGNDALHSKLHKLLVGALRNA CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAISGLIRVMERAARKAGGRLRRDFGEIEHLQVSKKGPADFVSKADRQAERTLWDELRA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH ARPGWGFLMEEGGEIEGEPGKPRFIIDPLDGTSNFLHGIPHFAISIAVQEPTLDGKGWGE CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHH VTAALVYQPITDESFWAEKSQGAWLQDRRLRVSARRHLDEALIATGIPFAGRGDMGEWIR HHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IYAELGPRIAGIRRNGAASLDLAWVAAGRFDGFWESSLAPWDTAAGCLLVREAGGFVSDY HHHHHCCCEECEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHC KGRSHPICDETVLAGNDALHSKLHKLLVGALRNA CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]