Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199927
Identifier: 87199927
GI number: 87199927
Start: 2023108
End: 2023530
Strand: Reverse
Name: 87199927
Synonym: Saro_1910
Alternate gene names: NA
Gene position: 2023530-2023108 (Counterclockwise)
Preceding gene: 87199928
Following gene: 87199923
Centisome position: 56.82
GC content: 59.81
Gene sequence:
>423_bases ATGAAGCGCCTCTTCTTCAACCGCGAAGGCGCCGCTGCCGTCGAGTTTGCACTCGTCGGTCCGCTGTTCATCGCGCTGCT GCTCGCAGTGTTCCAGTTCGGTGCGGCAGCCCAATCATACAACGCCCTGCGCGCGGCTTCGGCCGACGTTCAGCGGCATG TGGTGGTGGAGTACCAGGCCGGTAATCGCCTCACGAGCGACCAGATCGGCGCCTATGCGCTCGCCAAGGCGCAGGATTTG CCCTACATTCTCAAGACCACCGGCATTGATGCGTCTGCGGTCAAGAAAACGACATCGCGTGTCAGCGGAACGGTCGAATA CACCCTGAATTACACCTACAACGTTCCCAACGTGCTGTCGGCATTCGGTTTTCCGGACATCGCCCTCAATTTCTCGAGGC CGATCTTCGTATCCGCCACGTGA
Upstream 100 bases:
>100_bases ATGTCCAACTCACCATCCGCGACACGTACACCCCGATGTGGACCGACTTCGGAATCAGCGGTCCAATCTCGATGCGCCTC ACGCGAACGGTTCTGATAGG
Downstream 100 bases:
>100_bases TTTCGGCCCAGGCCGAAGATTCAGCTCGGAACGGACCTTACATTTCTGACCAATGATAAACTTCTGGCGAACCTTGCGCA TGGTTTACCACCGCACTCGC
Product: TadE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKRLFFNREGAAAVEFALVGPLFIALLLAVFQFGAAAQSYNALRAASADVQRHVVVEYQAGNRLTSDQIGAYALAKAQDL PYILKTTGIDASAVKKTTSRVSGTVEYTLNYTYNVPNVLSAFGFPDIALNFSRPIFVSAT
Sequences:
>Translated_140_residues MKRLFFNREGAAAVEFALVGPLFIALLLAVFQFGAAAQSYNALRAASADVQRHVVVEYQAGNRLTSDQIGAYALAKAQDL PYILKTTGIDASAVKKTTSRVSGTVEYTLNYTYNVPNVLSAFGFPDIALNFSRPIFVSAT >Mature_140_residues MKRLFFNREGAAAVEFALVGPLFIALLLAVFQFGAAAQSYNALRAASADVQRHVVVEYQAGNRLTSDQIGAYALAKAQDL PYILKTTGIDASAVKKTTSRVSGTVEYTLNYTYNVPNVLSAFGFPDIALNFSRPIFVSAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15116; Mature: 15116
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFFNREGAAAVEFALVGPLFIALLLAVFQFGAAAQSYNALRAASADVQRHVVVEYQA CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECC GNRLTSDQIGAYALAKAQDLPYILKTTGIDASAVKKTTSRVSGTVEYTLNYTYNVPNVLS CCEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCHHHHH AFGFPDIALNFSRPIFVSAT HCCCCCEEEECCCCEEEEEC >Mature Secondary Structure MKRLFFNREGAAAVEFALVGPLFIALLLAVFQFGAAAQSYNALRAASADVQRHVVVEYQA CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECC GNRLTSDQIGAYALAKAQDLPYILKTTGIDASAVKKTTSRVSGTVEYTLNYTYNVPNVLS CCEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCHHHHH AFGFPDIALNFSRPIFVSAT HCCCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA