Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199928

Identifier: 87199928

GI number: 87199928

Start: 2023527

End: 2023988

Strand: Reverse

Name: 87199928

Synonym: Saro_1911

Alternate gene names: NA

Gene position: 2023988-2023527 (Counterclockwise)

Preceding gene: 87199929

Following gene: 87199927

Centisome position: 56.83

GC content: 59.96

Gene sequence:

>462_bases
ATGACACGGTTCATCCCCTTTCTTTCCAGACTTCGCGCCTGTCGCGATGGTGCGATCATGATCGAGGTCGCGGTGCTGAC
ACCCGTGCTCGTGCTCTTTGGACTGGGCACCGTCGAGGTCAGTTCGCTGGTCGCGCGGCGCTCCGAACTCCAGAGCGCCC
TTGCCGAAGCCGTCGCTATCGCCCTTGCGTCGAAGCCCGACACGCAGAGCAAGATCGACACAATTGAGAGCGTTATTTCG
GCTTCGACCGGTGTTTCGACGGCGAATATCGACACGGCGGTGATCTATCGCTGCGGCATAGACCCCGGCTATGTCACCCT
TCCTGGCCTGTGCAGCCAGTCCGGCGAGATCTCGAAGTATGTCCAACTCACCATCCGCGACACGTACACCCCGATGTGGA
CCGACTTCGGAATCAGCGGTCCAATCTCGATGCGCCTCACGCGAACGGTTCTGATAGGATGA

Upstream 100 bases:

>100_bases
TCGCGGTCCAGGGCAACACCGTTATGACGAATTTCTGCCCCGCTGGCCTCACCACCGACACTGTCGTGAGTTCCGAGGGG
CCAAAGGTCATCCTTGTGTC

Downstream 100 bases:

>100_bases
AGCGCCTCTTCTTCAACCGCGAAGGCGCCGCTGCCGTCGAGTTTGCACTCGTCGGTCCGCTGTTCATCGCGCTGCTGCTC
GCAGTGTTCCAGTTCGGTGC

Product: TadE-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVIS
ASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG

Sequences:

>Translated_153_residues
MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVIS
ASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG
>Mature_152_residues
TRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVISA
STGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16357; Mature: 16226

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAI
CCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALASKPDTQSKIDTIESVISASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKY
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEE
VQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG
EEEEEECCCCCCEECCCCCCCHHHEEEEEEECC
>Mature Secondary Structure 
TRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAI
CCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALASKPDTQSKIDTIESVISASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKY
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEE
VQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG
EEEEEECCCCCCEECCCCCCCHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA