Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199928
Identifier: 87199928
GI number: 87199928
Start: 2023527
End: 2023988
Strand: Reverse
Name: 87199928
Synonym: Saro_1911
Alternate gene names: NA
Gene position: 2023988-2023527 (Counterclockwise)
Preceding gene: 87199929
Following gene: 87199927
Centisome position: 56.83
GC content: 59.96
Gene sequence:
>462_bases ATGACACGGTTCATCCCCTTTCTTTCCAGACTTCGCGCCTGTCGCGATGGTGCGATCATGATCGAGGTCGCGGTGCTGAC ACCCGTGCTCGTGCTCTTTGGACTGGGCACCGTCGAGGTCAGTTCGCTGGTCGCGCGGCGCTCCGAACTCCAGAGCGCCC TTGCCGAAGCCGTCGCTATCGCCCTTGCGTCGAAGCCCGACACGCAGAGCAAGATCGACACAATTGAGAGCGTTATTTCG GCTTCGACCGGTGTTTCGACGGCGAATATCGACACGGCGGTGATCTATCGCTGCGGCATAGACCCCGGCTATGTCACCCT TCCTGGCCTGTGCAGCCAGTCCGGCGAGATCTCGAAGTATGTCCAACTCACCATCCGCGACACGTACACCCCGATGTGGA CCGACTTCGGAATCAGCGGTCCAATCTCGATGCGCCTCACGCGAACGGTTCTGATAGGATGA
Upstream 100 bases:
>100_bases TCGCGGTCCAGGGCAACACCGTTATGACGAATTTCTGCCCCGCTGGCCTCACCACCGACACTGTCGTGAGTTCCGAGGGG CCAAAGGTCATCCTTGTGTC
Downstream 100 bases:
>100_bases AGCGCCTCTTCTTCAACCGCGAAGGCGCCGCTGCCGTCGAGTTTGCACTCGTCGGTCCGCTGTTCATCGCGCTGCTGCTC GCAGTGTTCCAGTTCGGTGC
Product: TadE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVIS ASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG
Sequences:
>Translated_153_residues MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVIS ASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG >Mature_152_residues TRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAIALASKPDTQSKIDTIESVISA STGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKYVQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16357; Mature: 16226
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAI CCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ALASKPDTQSKIDTIESVISASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKY HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEE VQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG EEEEEECCCCCCEECCCCCCCHHHEEEEEEECC >Mature Secondary Structure TRFIPFLSRLRACRDGAIMIEVAVLTPVLVLFGLGTVEVSSLVARRSELQSALAEAVAI CCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ALASKPDTQSKIDTIESVISASTGVSTANIDTAVIYRCGIDPGYVTLPGLCSQSGEISKY HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEE VQLTIRDTYTPMWTDFGISGPISMRLTRTVLIG EEEEEECCCCCCEECCCCCCCHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA