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The map label for this gene is nagD [C]

Identifier: 87199875

GI number: 87199875

Start: 1958674

End: 1959516

Strand: Reverse

Name: nagD [C]

Synonym: Saro_1858

Alternate gene names: 87199875

Gene position: 1959516-1958674 (Counterclockwise)

Preceding gene: 87199876

Following gene: 87199873

Centisome position: 55.02

GC content: 67.26

Gene sequence:

>843_bases
TTGACATTTTCCCCGGAATTCAAGGCCCGTCTCAAGGACGCGGCCGGTTTCATCTTCGACATGGACGGCACCATCGCGCT
GGGCGACGCCAAGAGCGGCGGCCACCGCGCCCTGCCCCATGCCATCGAAGTCCTTGAAACGCTCAAGGCCGCCGGTACGC
CGTTCGTGGTCTTCACCAACGGCACCGCAAAGCCCCCGGCGGCCTATGCCAACTCCTTGAGGAACGCAGGCTTTCCCGTG
GAAGACAGCCAGATGCTGACGCCCTCGTCCTCGGCGGCGGTGTGGCTGGGCAAGGTCGGCATGGGCAAGGTCCGCGTCCT
CGGAAACCCCGGTTGCGCCGCCCCGCTGATCGACGTCGGCCTCGAGGTCGTCGGCCCCTCGCAGGAGGCGGACGGCGTCG
AGGCGGTCTACACGGGCTGGTTCCGCGAGTTCGATTTCAACGCCCTCGAGGCCGCCTGCCACTCGTTGTGGAACGGCGCG
AAGCTGGTGACCGCCAGCAACGTCCCGTTCTTCGCCACCGAGAACGGCCGCGCGATCGGCGCGAGCTTTCCCATCAACGC
CATGCTGACGGCCATGACCGGAAAGCGCCCGCGCATTCTCGGCAAGCCGTCGCGAGTTGCGTTCGAGACGGCGATGTCCA
TCATGGGCCTGCCGCGTTCCGCGGCGAAGAACGTCGTCGTCGTTGGCGACGACCCGGCCCTCGAGATGCGGATGGCGAAC
GCCGTCGGTGCACACTCGGTCGGACTCGCGACGGGGATCATGGGCGGCGATGCGGCTCTTCCGGAAAAGGATCGGCCCTC
GGCGCTGCTAAAGGACCTGCGCCCCCTGCTGGAGGCGCTTTGA

Upstream 100 bases:

>100_bases
TCCTCTCGTTGCTGCGCCAGCTTGCCGCAAGGCCTGACGCCCGCGACATCGTGATCGAACGCGAAGGCTTCCGCCTTGCC
CTCCATGCCGGAGCATCCCT

Downstream 100 bases:

>100_bases
TCGCCGCCGCGTGTGGTTAGGTGCTTTTAGGTGCTTTTAGGTGCCGTTCGGGTCATTCACCCGCATTTCCGCCTTGAAGT
GCTGTATTCATTCACAATCA

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTFSPEFKARLKDAAGFIFDMDGTIALGDAKSGGHRALPHAIEVLETLKAAGTPFVVFTNGTAKPPAAYANSLRNAGFPV
EDSQMLTPSSSAAVWLGKVGMGKVRVLGNPGCAAPLIDVGLEVVGPSQEADGVEAVYTGWFREFDFNALEAACHSLWNGA
KLVTASNVPFFATENGRAIGASFPINAMLTAMTGKRPRILGKPSRVAFETAMSIMGLPRSAAKNVVVVGDDPALEMRMAN
AVGAHSVGLATGIMGGDAALPEKDRPSALLKDLRPLLEAL

Sequences:

>Translated_280_residues
MTFSPEFKARLKDAAGFIFDMDGTIALGDAKSGGHRALPHAIEVLETLKAAGTPFVVFTNGTAKPPAAYANSLRNAGFPV
EDSQMLTPSSSAAVWLGKVGMGKVRVLGNPGCAAPLIDVGLEVVGPSQEADGVEAVYTGWFREFDFNALEAACHSLWNGA
KLVTASNVPFFATENGRAIGASFPINAMLTAMTGKRPRILGKPSRVAFETAMSIMGLPRSAAKNVVVVGDDPALEMRMAN
AVGAHSVGLATGIMGGDAALPEKDRPSALLKDLRPLLEAL
>Mature_279_residues
TFSPEFKARLKDAAGFIFDMDGTIALGDAKSGGHRALPHAIEVLETLKAAGTPFVVFTNGTAKPPAAYANSLRNAGFPVE
DSQMLTPSSSAAVWLGKVGMGKVRVLGNPGCAAPLIDVGLEVVGPSQEADGVEAVYTGWFREFDFNALEAACHSLWNGAK
LVTASNVPFFATENGRAIGASFPINAMLTAMTGKRPRILGKPSRVAFETAMSIMGLPRSAAKNVVVVGDDPALEMRMANA
VGAHSVGLATGIMGGDAALPEKDRPSALLKDLRPLLEAL

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI10092677, Length=255, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI108796653, Length=272, Percent_Identity=27.5735294117647, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319965, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 29180; Mature: 29049

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSPEFKARLKDAAGFIFDMDGTIALGDAKSGGHRALPHAIEVLETLKAAGTPFVVFTN
CCCCHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
GTAKPPAAYANSLRNAGFPVEDSQMLTPSSSAAVWLGKVGMGKVRVLGNPGCAAPLIDVG
CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCEEEEECCCCCCCHHHHCC
LEVVGPSQEADGVEAVYTGWFREFDFNALEAACHSLWNGAKLVTASNVPFFATENGRAIG
EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEE
ASFPINAMLTAMTGKRPRILGKPSRVAFETAMSIMGLPRSAAKNVVVVGDDPALEMRMAN
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHH
AVGAHSVGLATGIMGGDAALPEKDRPSALLKDLRPLLEAL
HCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TFSPEFKARLKDAAGFIFDMDGTIALGDAKSGGHRALPHAIEVLETLKAAGTPFVVFTN
CCCHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
GTAKPPAAYANSLRNAGFPVEDSQMLTPSSSAAVWLGKVGMGKVRVLGNPGCAAPLIDVG
CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCEEEEECCCCCCCHHHHCC
LEVVGPSQEADGVEAVYTGWFREFDFNALEAACHSLWNGAKLVTASNVPFFATENGRAIG
EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEE
ASFPINAMLTAMTGKRPRILGKPSRVAFETAMSIMGLPRSAAKNVVVVGDDPALEMRMAN
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHH
AVGAHSVGLATGIMGGDAALPEKDRPSALLKDLRPLLEAL
HCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]