The gene/protein map for NC_007794 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 87199847

GI number: 87199847

Start: 1930793

End: 1931098

Strand: Reverse

Name: phnA [H]

Synonym: Saro_1830

Alternate gene names: 87199847

Gene position: 1931098-1930793 (Counterclockwise)

Preceding gene: 87199848

Following gene: 87199846

Centisome position: 54.22

GC content: 62.75

Gene sequence:

>306_bases
GTGAGCGACGAAGAAGACTATGTGTACGACGAGGAAAGCGGCGAATGGATGCCCGCATCCGAACTGGCCGCCAAACGTGC
CGCCGCAAGCACCGTCGAGGTCCGCGATGCAGTGGGCAACCTCCTTGCCGACGGGGACCAGGTGACGCTCATCAAGGACC
TTGAGGTCAAGGGCGCCGGGCAGACGCTCAAGCAGGGCACCCTGATCAAGTCGATCCGACTTACCGGGGACCCGCAGGAA
ATCGACTGCAAGTATCCCGGCATCAAGGGCCTGGTCCTGCGCGCTGAATTCGTGCGCAAGCGCTAG

Upstream 100 bases:

>100_bases
CTGATGGTCCTGCTCGGCGGGAAACTTATCGTCGACGCGGTGATTTGAACTGGCTTTCCGTGTCCCGGAGTGCCAACGCG
AAGAGGACAGGAGAACCGCG

Downstream 100 bases:

>100_bases
AGGCTCCACGCGCGCGACAGCCCGCAGGGAATCGCGCGCGCCGTCATGCAGTAGGTGGAAAGCGCCTAAAAATCGTATGC
ATTGCATACATTTTTTCGGC

Product: PhnA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSDEEDYVYDEESGEWMPASELAAKRAAASTVEVRDAVGNLLADGDQVTLIKDLEVKGAGQTLKQGTLIKSIRLTGDPQE
IDCKYPGIKGLVLRAEFVRKR

Sequences:

>Translated_101_residues
MSDEEDYVYDEESGEWMPASELAAKRAAASTVEVRDAVGNLLADGDQVTLIKDLEVKGAGQTLKQGTLIKSIRLTGDPQE
IDCKYPGIKGLVLRAEFVRKR
>Mature_100_residues
SDEEDYVYDEESGEWMPASELAAKRAAASTVEVRDAVGNLLADGDQVTLIKDLEVKGAGQTLKQGTLIKSIRLTGDPQEI
DCKYPGIKGLVLRAEFVRKR

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=98, Percent_Identity=45.9183673469388, Blast_Score=79, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 11070; Mature: 10938

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEEDYVYDEESGEWMPASELAAKRAAASTVEVRDAVGNLLADGDQVTLIKDLEVKGAG
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
QTLKQGTLIKSIRLTGDPQEIDCKYPGIKGLVLRAEFVRKR
CCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEHHHHHCC
>Mature Secondary Structure 
SDEEDYVYDEESGEWMPASELAAKRAAASTVEVRDAVGNLLADGDQVTLIKDLEVKGAG
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
QTLKQGTLIKSIRLTGDPQEIDCKYPGIKGLVLRAEFVRKR
CCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]