Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199846

Identifier: 87199846

GI number: 87199846

Start: 1930221

End: 1930520

Strand: Reverse

Name: 87199846

Synonym: Saro_1829

Alternate gene names: NA

Gene position: 1930520-1930221 (Counterclockwise)

Preceding gene: 87199847

Following gene: 87199845

Centisome position: 54.2

GC content: 65.0

Gene sequence:

>300_bases
ATGTTCAATTCGTCGTTCGCCATCACCGCCGCCGCCCTCCTCCTCGCCGCTCCCGCCGCCGCCAGCGCTGCCGAAGGCGA
GACCGGTTCGTTCACCTACCAGGGCGTGAAGTACGACTACACCGCCGAGCAGCAGGGCGAAGTCAAGGTTCTGAAGGGCT
CGGCCTATGCCGGCAAGGTGCCGTTCGAACTGCGCGTCACCAAGCGCTCGGTCACCGGCCGCTTCAACGGTCGCCCGGTC
ACCTTCGACGTCAAGGACGTGAAGCCGATCTCGAGCAAGGCTTCCAAGCTCGCCGATTGA

Upstream 100 bases:

>100_bases
GGCAAATACAATTGCCGCGTTGCACACAAAGATTATGCTGCGACGCAACAAGATAAGGGTGCTGAAGGCAATCTTTCCTT
ATCTTCCAGGAGACATTGCC

Downstream 100 bases:

>100_bases
AAGCGTAGCAACACGGGGCTGCCTCGCAACTTCGCGAGCGGTGCCAAACCCGTGAACCGGGCCAGCTTCGCGCTGAACCG
GTAACAGCAAAGGGCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MFNSSFAITAAALLLAAPAAASAAEGETGSFTYQGVKYDYTAEQQGEVKVLKGSAYAGKVPFELRVTKRSVTGRFNGRPV
TFDVKDVKPISSKASKLAD

Sequences:

>Translated_99_residues
MFNSSFAITAAALLLAAPAAASAAEGETGSFTYQGVKYDYTAEQQGEVKVLKGSAYAGKVPFELRVTKRSVTGRFNGRPV
TFDVKDVKPISSKASKLAD
>Mature_99_residues
MFNSSFAITAAALLLAAPAAASAAEGETGSFTYQGVKYDYTAEQQGEVKVLKGSAYAGKVPFELRVTKRSVTGRFNGRPV
TFDVKDVKPISSKASKLAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10453; Mature: 10453

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSSFAITAAALLLAAPAAASAAEGETGSFTYQGVKYDYTAEQQGEVKVLKGSAYAGKV
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCCCEEEEECCCCCCCC
PFELRVTKRSVTGRFNGRPVTFDVKDVKPISSKASKLAD
CEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHCCC
>Mature Secondary Structure
MFNSSFAITAAALLLAAPAAASAAEGETGSFTYQGVKYDYTAEQQGEVKVLKGSAYAGKV
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCCCEEEEECCCCCCCC
PFELRVTKRSVTGRFNGRPVTFDVKDVKPISSKASKLAD
CEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA