Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is linC [H]
Identifier: 87199838
GI number: 87199838
Start: 1921284
End: 1922516
Strand: Reverse
Name: linC [H]
Synonym: Saro_1821
Alternate gene names: 87199838
Gene position: 1922516-1921284 (Counterclockwise)
Preceding gene: 87199839
Following gene: 87199837
Centisome position: 53.98
GC content: 66.02
Gene sequence:
>1233_bases ATGGCAGCCACGCTGGCACCCGACCGCGCGATCAATCCCCACGATGTCAGCCTCAACGCGCTCTACACCGAAGATCGCTG GCGCGAACCGTTCCGCTGGCTGCGCGAGAACATGCCGGTCAGCTACCGCGCCGAAAGCCCGTTCGGCGCCTACTGGTCTG TCGTCACGCACGATCTGATCCAGCAGGTCGAGCTTGATCCGGGGACCTATTCCTCATCGTGGCAGCGCGGCAACATCACG ATCGCGGATTCGGTGAACGAGACCGAGTTTCCCAACTTCATCGCGCAGGACCCGCCGATCCACACCGCCCAGCGCAAGGT CATCGCCCCCGCGTTCGGCCCCAGCCAGATGGTGAAGCTGGAACGCCTTGTCCGCGAACGCACCACCCAGTTGCTCGACG GTCTGCCCATGGGCGAGGAGTTCGACTGGGTAGAGCGCGTGTCGATCCCGCTGACCCTGGGCATGCTCCTCATCCTGTTC GACATGCCCTTCGACGAATGGCGCGACATCAAGCGCTGGTCCGACTGGGCGAGCGGCGTTTCGGAAGACAGCCTCAACGA CGCCTACCGCGCCGAATTCGTCCAGCAGATGGGCCAGATGCTGATGCGCTTCGACCGCGAGCTCGAGGCACGCCGCGCCC TGCCGCCCAGCGACGACCTGCTTAGCCGCATGGTCCATTCCGATGCGATGGGCCACCTCACCCCGCCCGAGCGCATTGCC AACATCGCCCTGCTGATCGTCGGCGGCAACGACACCACGCGCAATTCGATGAGCGGCCTGATCGAGGCGCTCCACCGCTA TCCGGCCGAACTGGACAAGCTGCGCGCCGATCCCGCGCTTTCGGCCAACGCCGCGCAGGAAATCATCCGCTGGCAATCGC CGGTCACCCACATGCGCCGCACCCTGACGCGCGATGCCGAGCTTGGCGGCCAACGCCTGGCCGAAGGCGACAAGATCGTC ATGTGGTACATATCCGGCAATCGCGACGAGAACGTGTTCCCCGATGCCGAGCGCTTCGACGTAACGCGCGAGAACGCCCG CCGCCACATCGGCTTCGGCCACGGCATTCACCGCTGCGTCGGCGCTCGCCTTGCCGAAGTCCAGATCGCGGCGGTGATCG AGGAAATCGCCACCCGCCGCTTGCGCATCACGCCGCAAGGCGCGCCCACGCGGCTTGCCAGCCCCTTCCTGCACGGCTTC ACCGCGATGCCCGTGGTCATGTCCCGCGATTGA
Upstream 100 bases:
>100_bases CCCAAAACATGACCGATCACCGCAAGCTCTGGACTTTAACTGCCCGACTAAGGATAGTTCCGCCCAAGCCCGCGGCAATG TCGGGCAATGGAGCAGGATC
Downstream 100 bases:
>100_bases GGAGCGCCAGATGACCCAGTTGCCGCGCGTCTGCATCATCGGGGCCGGCTGCTCCGGTTTCACCACCGCCAAGTGCCTGC AGGATTACGGCATCCCCTTC
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450 111; Cytochrome P450lin [H]
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAATLAPDRAINPHDVSLNALYTEDRWREPFRWLRENMPVSYRAESPFGAYWSVVTHDLIQQVELDPGTYSSSWQRGNIT IADSVNETEFPNFIAQDPPIHTAQRKVIAPAFGPSQMVKLERLVRERTTQLLDGLPMGEEFDWVERVSIPLTLGMLLILF DMPFDEWRDIKRWSDWASGVSEDSLNDAYRAEFVQQMGQMLMRFDRELEARRALPPSDDLLSRMVHSDAMGHLTPPERIA NIALLIVGGNDTTRNSMSGLIEALHRYPAELDKLRADPALSANAAQEIIRWQSPVTHMRRTLTRDAELGGQRLAEGDKIV MWYISGNRDENVFPDAERFDVTRENARRHIGFGHGIHRCVGARLAEVQIAAVIEEIATRRLRITPQGAPTRLASPFLHGF TAMPVVMSRD
Sequences:
>Translated_410_residues MAATLAPDRAINPHDVSLNALYTEDRWREPFRWLRENMPVSYRAESPFGAYWSVVTHDLIQQVELDPGTYSSSWQRGNIT IADSVNETEFPNFIAQDPPIHTAQRKVIAPAFGPSQMVKLERLVRERTTQLLDGLPMGEEFDWVERVSIPLTLGMLLILF DMPFDEWRDIKRWSDWASGVSEDSLNDAYRAEFVQQMGQMLMRFDRELEARRALPPSDDLLSRMVHSDAMGHLTPPERIA NIALLIVGGNDTTRNSMSGLIEALHRYPAELDKLRADPALSANAAQEIIRWQSPVTHMRRTLTRDAELGGQRLAEGDKIV MWYISGNRDENVFPDAERFDVTRENARRHIGFGHGIHRCVGARLAEVQIAAVIEEIATRRLRITPQGAPTRLASPFLHGF TAMPVVMSRD >Mature_409_residues AATLAPDRAINPHDVSLNALYTEDRWREPFRWLRENMPVSYRAESPFGAYWSVVTHDLIQQVELDPGTYSSSWQRGNITI ADSVNETEFPNFIAQDPPIHTAQRKVIAPAFGPSQMVKLERLVRERTTQLLDGLPMGEEFDWVERVSIPLTLGMLLILFD MPFDEWRDIKRWSDWASGVSEDSLNDAYRAEFVQQMGQMLMRFDRELEARRALPPSDDLLSRMVHSDAMGHLTPPERIAN IALLIVGGNDTTRNSMSGLIEALHRYPAELDKLRADPALSANAAQEIIRWQSPVTHMRRTLTRDAELGGQRLAEGDKIVM WYISGNRDENVFPDAERFDVTRENARRHIGFGHGIHRCVGARLAEVQIAAVIEEIATRRLRITPQGAPTRLASPFLHGFT AMPVVMSRD
Specific function: Catalyzes the 8-methyl hydroxylation of linalool [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.99.28 [H]
Molecular weight: Translated: 46576; Mature: 46445
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATLAPDRAINPHDVSLNALYTEDRWREPFRWLRENMPVSYRAESPFGAYWSVVTHDLI CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHH QQVELDPGTYSSSWQRGNITIADSVNETEFPNFIAQDPPIHTAQRKVIAPAFGPSQMVKL HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCHHCCCEECCCCCHHHHHHH ERLVRERTTQLLDGLPMGEEFDWVERVSIPLTLGMLLILFDMPFDEWRDIKRWSDWASGV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SEDSLNDAYRAEFVQQMGQMLMRFDRELEARRALPPSDDLLSRMVHSDAMGHLTPPERIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHC NIALLIVGGNDTTRNSMSGLIEALHRYPAELDKLRADPALSANAAQEIIRWQSPVTHMRR CEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH TLTRDAELGGQRLAEGDKIVMWYISGNRDENVFPDAERFDVTRENARRHIGFGHGIHRCV HHHHHHHHCCHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHCCCCHHHHHHH GARLAEVQIAAVIEEIATRRLRITPQGAPTRLASPFLHGFTAMPVVMSRD HHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCEEECCC >Mature Secondary Structure AATLAPDRAINPHDVSLNALYTEDRWREPFRWLRENMPVSYRAESPFGAYWSVVTHDLI CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHH QQVELDPGTYSSSWQRGNITIADSVNETEFPNFIAQDPPIHTAQRKVIAPAFGPSQMVKL HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCHHCCCEECCCCCHHHHHHH ERLVRERTTQLLDGLPMGEEFDWVERVSIPLTLGMLLILFDMPFDEWRDIKRWSDWASGV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SEDSLNDAYRAEFVQQMGQMLMRFDRELEARRALPPSDDLLSRMVHSDAMGHLTPPERIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHC NIALLIVGGNDTTRNSMSGLIEALHRYPAELDKLRADPALSANAAQEIIRWQSPVTHMRR CEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH TLTRDAELGGQRLAEGDKIVMWYISGNRDENVFPDAERFDVTRENARRHIGFGHGIHRCV HHHHHHHHCCHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHCCCCHHHHHHH GARLAEVQIAAVIEEIATRRLRITPQGAPTRLASPFLHGFTAMPVVMSRD HHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8376348; 2295633; 3813557; 2578028; 1610873; 12237225 [H]