Click here to switch to the map view.

The map label for this gene is 87199839

Identifier: 87199839

GI number: 87199839

Start: 1922605

End: 1923888

Strand: Reverse

Name: 87199839

Synonym: Saro_1822

Alternate gene names: NA

Gene position: 1923888-1922605 (Counterclockwise)

Preceding gene: 87199840

Following gene: 87199838

Centisome position: 54.02

GC content: 68.93

Gene sequence:

>1284_bases
ATGGCGACGAGCGCGCCCCGCTCGTTCTTTCTGCCCCGGCCGCTCGCGCTGCCGGGGCGGGGTTTCTGGGTGATCGCCCA
CCGCTGGGCGGGCCTTACCCTTGCGCTGTTCCTTGGCGTGGCCGGGCTCACCGGCTCGCTCCTGCCGTGGATCGAGGAGC
TGGAAGCGGCCACCGCGCCGCAGCTCCACAATTCGGTCTGGACCGGCACGCCCGATCCCCTGCGCGTGCGCGAGGAAGTG
CTGGCCCGCCACCCCGGCGCGGCCGTCGATTTCCTCCCCCTCACCGTGGAGCCAGGCAAGTCCCTGCGCCTCCACCTCCA
CTGGCTCGACCCGAAAACCGGGCTGGAGCGCGAACGCGGCCCCGGGGTGCCCGACTGGAACGACCTGTTCCTGAATCCCG
TCTCAGGTGAAGAGCAGGGCCGCCGCGAATGGGGCAATATCGGGCAAGGCCTCAAGAACCTCATGCCCTTCCTCTACCGC
CTGCACTATAGCCTCGCGCTTGGCGCGATCGGCACGCTGGTCTTCGGGGTGGCGGCGCTGATCTGGACCGTGGACTGCTT
CGTCGGATTCTACCTGACCCTGCCCCCGCGCGCGCCAAGGTCCGCCCGAGCCCCTTTCCTCGAACGCTGGCGCCCCAGCT
GGCGCGTGCGGTGGAAGTCCACGCCCTACAAGCTCAACTTCGACCTCCACCGCGCCGGGGGCCTGTGGCTCTGGCCGCTG
CTGCTGGTCTTTGCGTGGTCGAGCGTCTCGTTCAACCTGCCCCAGGTCCACGTACCGATAATGCAGGCGGTGGGCGCGCA
GGACGCGCGTCTCGTGCTGCTGGAAAGCACGCTACCCGCCCCCCGCAACGCCCCGCGGCTGGGCTTCCGGGAAGCCGTTG
AACGGGGGCAGGAGCTTGCCGAACAGGAGGCGACGAAGCAGGGTCTTGCCGTCCTCGATGAAGGCGAGAGCTGGATCTGG
CACGTGCCCACCAGCGGCCTCTACGCCTACGGCTTCACCACCGGGGCCGACATCAGCCACCACGGCGGCGGCACCCGCGT
CGCCTTCGACAGCAACACCGGCGTACTGAAGTCAGTGGACTGGCCGAGCGGCGTCAACGGCGCCAACACCTTCACCAACT
GGCTGACTGCGCTGCACACCGCCCATGTCTTCGGCCTGCCCTACCGCCTGTTCGTCAGCGCGCTCGGCCTGATGGTCACC
ATGCTTTCGATCACCGGCGTGGTGATCTGGCTGAAGAAGCGCTCCGCCCGCGCCGGCCGCGCAATCCGCCAGCCCAAAAC
ATGA

Upstream 100 bases:

>100_bases
CCAACGTCACCAATCACAAGCACCTCGCCAGCCTCTACTGGGACCAGTCGTTCTACGCTCCGCCGCGCAGCGTGACCGGC
TCGATCCGGATGACCTTCTG

Downstream 100 bases:

>100_bases
CCGATCACCGCAAGCTCTGGACTTTAACTGCCCGACTAAGGATAGTTCCGCCCAAGCCCGCGGCAATGTCGGGCAATGGA
GCAGGATCATGGCAGCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; Peptidase; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MATSAPRSFFLPRPLALPGRGFWVIAHRWAGLTLALFLGVAGLTGSLLPWIEELEAATAPQLHNSVWTGTPDPLRVREEV
LARHPGAAVDFLPLTVEPGKSLRLHLHWLDPKTGLERERGPGVPDWNDLFLNPVSGEEQGRREWGNIGQGLKNLMPFLYR
LHYSLALGAIGTLVFGVAALIWTVDCFVGFYLTLPPRAPRSARAPFLERWRPSWRVRWKSTPYKLNFDLHRAGGLWLWPL
LLVFAWSSVSFNLPQVHVPIMQAVGAQDARLVLLESTLPAPRNAPRLGFREAVERGQELAEQEATKQGLAVLDEGESWIW
HVPTSGLYAYGFTTGADISHHGGGTRVAFDSNTGVLKSVDWPSGVNGANTFTNWLTALHTAHVFGLPYRLFVSALGLMVT
MLSITGVVIWLKKRSARAGRAIRQPKT

Sequences:

>Translated_427_residues
MATSAPRSFFLPRPLALPGRGFWVIAHRWAGLTLALFLGVAGLTGSLLPWIEELEAATAPQLHNSVWTGTPDPLRVREEV
LARHPGAAVDFLPLTVEPGKSLRLHLHWLDPKTGLERERGPGVPDWNDLFLNPVSGEEQGRREWGNIGQGLKNLMPFLYR
LHYSLALGAIGTLVFGVAALIWTVDCFVGFYLTLPPRAPRSARAPFLERWRPSWRVRWKSTPYKLNFDLHRAGGLWLWPL
LLVFAWSSVSFNLPQVHVPIMQAVGAQDARLVLLESTLPAPRNAPRLGFREAVERGQELAEQEATKQGLAVLDEGESWIW
HVPTSGLYAYGFTTGADISHHGGGTRVAFDSNTGVLKSVDWPSGVNGANTFTNWLTALHTAHVFGLPYRLFVSALGLMVT
MLSITGVVIWLKKRSARAGRAIRQPKT
>Mature_426_residues
ATSAPRSFFLPRPLALPGRGFWVIAHRWAGLTLALFLGVAGLTGSLLPWIEELEAATAPQLHNSVWTGTPDPLRVREEVL
ARHPGAAVDFLPLTVEPGKSLRLHLHWLDPKTGLERERGPGVPDWNDLFLNPVSGEEQGRREWGNIGQGLKNLMPFLYRL
HYSLALGAIGTLVFGVAALIWTVDCFVGFYLTLPPRAPRSARAPFLERWRPSWRVRWKSTPYKLNFDLHRAGGLWLWPLL
LVFAWSSVSFNLPQVHVPIMQAVGAQDARLVLLESTLPAPRNAPRLGFREAVERGQELAEQEATKQGLAVLDEGESWIWH
VPTSGLYAYGFTTGADISHHGGGTRVAFDSNTGVLKSVDWPSGVNGANTFTNWLTALHTAHVFGLPYRLFVSALGLMVTM
LSITGVVIWLKKRSARAGRAIRQPKT

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47277; Mature: 47146

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSAPRSFFLPRPLALPGRGFWVIAHRWAGLTLALFLGVAGLTGSLLPWIEELEAATAP
CCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
QLHNSVWTGTPDPLRVREEVLARHPGAAVDFLPLTVEPGKSLRLHLHWLDPKTGLERERG
HHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
PGVPDWNDLFLNPVSGEEQGRREWGNIGQGLKNLMPFLYRLHYSLALGAIGTLVFGVAAL
CCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWTVDCFVGFYLTLPPRAPRSARAPFLERWRPSWRVRWKSTPYKLNFDLHRAGGLWLWPL
HHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEECCCCHHHHHH
LLVFAWSSVSFNLPQVHVPIMQAVGAQDARLVLLESTLPAPRNAPRLGFREAVERGQELA
HHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
EQEATKQGLAVLDEGESWIWHVPTSGLYAYGFTTGADISHHGGGTRVAFDSNTGVLKSVD
HHHHHHCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEECC
WPSGVNGANTFTNWLTALHTAHVFGLPYRLFVSALGLMVTMLSITGVVIWLKKRSARAGR
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCC
AIRQPKT
CCCCCCC
>Mature Secondary Structure 
ATSAPRSFFLPRPLALPGRGFWVIAHRWAGLTLALFLGVAGLTGSLLPWIEELEAATAP
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
QLHNSVWTGTPDPLRVREEVLARHPGAAVDFLPLTVEPGKSLRLHLHWLDPKTGLERERG
HHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
PGVPDWNDLFLNPVSGEEQGRREWGNIGQGLKNLMPFLYRLHYSLALGAIGTLVFGVAAL
CCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWTVDCFVGFYLTLPPRAPRSARAPFLERWRPSWRVRWKSTPYKLNFDLHRAGGLWLWPL
HHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEECCCCHHHHHH
LLVFAWSSVSFNLPQVHVPIMQAVGAQDARLVLLESTLPAPRNAPRLGFREAVERGQELA
HHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
EQEATKQGLAVLDEGESWIWHVPTSGLYAYGFTTGADISHHGGGTRVAFDSNTGVLKSVD
HHHHHHCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEECC
WPSGVNGANTFTNWLTALHTAHVFGLPYRLFVSALGLMVTMLSITGVVIWLKKRSARAGR
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCC
AIRQPKT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA