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The map label for this gene is crtI [H]

Identifier: 87199833

GI number: 87199833

Start: 1914723

End: 1916201

Strand: Reverse

Name: crtI [H]

Synonym: Saro_1816

Alternate gene names: 87199833

Gene position: 1916201-1914723 (Counterclockwise)

Preceding gene: 87199834

Following gene: 87199832

Centisome position: 53.8

GC content: 63.35

Gene sequence:

>1479_bases
ATGAAGCGTGCATGTGTCATCGGCGCCGGATTTGGCGGCCTCGCCCTCGCCATCCGCCTGCAATCGGGGGGCGTCCAGAC
GACCCTGATCGAGGCTCGCGACAAGCCGGGCGGGCGCGCCTATTTCTGGGAGAAGGACGGCTTCACCTTCGACGGCGGCC
CGACCGTCATCACCGATCCGGCGTGCCTGGAAGAGCTGTGGGCGCTCAAGGGCCATCGCATGGCCGACGACGTGGAACTC
ATGCCGGTCATGCCGTTCTACCGCCTCAACTGGGCGGACGGCACCAACTTCGACTATTCCAACGACGACGCGAGCCTGCG
CGCTGAGATCGCCAAGCTGGAGCCGGCGGACGTTGCCGGATACGACGATTTCCTGCGCTATTCCGCCGGCGTGTTCGAGG
AAGGCTACGTCAAGCTCGGCGCCGTGCCGTTCCTCGACTTCGCGAGCATGATCAAGGCCGCGCCCGCGCTGGCCCGCTAC
CAGGCCTGGCGCTCGGTCTATTCGATGGTCTCCAGCTTCGTCCGCAACGAGAAGCTGCGCGAGGCCTTCAGTTTCCACAC
TCTGCTGGTCGGCGGAAACCCGATGACGACCAGCGCGATCTATGCGCTGATCCACAAGCTGGAGAAAGACGGCGGCGTGT
GGTGGGCCAAGGGCGGCACCAACCGCCTGATCGAGGGCATGGTGACCCATTTCCGGCGGATCGGCGGGGAAGTGCGGATC
GGCGATCCGGTAACGCGCGTCGAGACGCTGGGAACCCGGGTGACCGGGGTCGAGACCCGCAGCGGCTGGTCGGGCAAGTT
CGACGCCGTAGCGTCGAATGCCGACGTCATGCATTCGTACCGCGACCTTCTGTCTGACAACTCACATGCAAAACGCCGCG
CAAAGTCTCTCGGCAAAAAGAGATTTTCACCAAGCCTCTTCGTCGTCCACTTCGGCATCGAAGGAACCTGGCCCGGTATC
CCGCATCACATGATCCTGTTCGGCCCGCGCTACAAGGGGCTGCTCGACGACATCTACACCCATGGCGTGCTGCCGCAGGA
CTTCTCGATCTACCTGCACCATCCCACCGTGACGGACCCCTCGGTCGCGCCCGAAGGTATGAGCACGTTCTACGCGCTGG
TGCCGGTGGCGAACATGGGCAAGTTGCCGGTCAACTGGGACGAGGTCGGTCCCATCCTCGAGAAGCGCATACTGGATGAA
GTGGGCCGCAGGCTCATCCCCGATATCCACACGCGTATCGTAACGAAGTTCCATTACGCTCCGAGCGACTTCTCGACCGA
TCTTTCCGCGCACCTCGGAAGTGCATTCAGCCTTGAACCGCTGCTCACGCAAAGTGCATGGTTCCGGGCACATAATCGCG
ACGACGCGATTTCCAATTTCTACCTTGTCGGCGCGGGGACGCACCCCGGTGCCGGCATTCCGGGCGTGGTCGGCTCTGCC
AAGGCCACGGCAAGGCTGATGCTGGAGGATCTTTCGTGA

Upstream 100 bases:

>100_bases
TTCTTTCGGGCAAGCCGCCGGTACCGGTAACCAAGGCCATCGGCGTGCTCACCGGCCTTGGCGCGCGCCCCAACCCACTT
TCATTTGCAGGAACCCGCGC

Downstream 100 bases:

>100_bases
AACGCCTCGCCGTCTATTGCGGCTCCGCTTCGCCCGCCGATGGCCGTTACGTGACGCTTGCGCGCGAAGTGGGCCAGGAA
CTGGCCCGGCGGGGCATCGG

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKRACVIGAGFGGLALAIRLQSGGVQTTLIEARDKPGGRAYFWEKDGFTFDGGPTVITDPACLEELWALKGHRMADDVEL
MPVMPFYRLNWADGTNFDYSNDDASLRAEIAKLEPADVAGYDDFLRYSAGVFEEGYVKLGAVPFLDFASMIKAAPALARY
QAWRSVYSMVSSFVRNEKLREAFSFHTLLVGGNPMTTSAIYALIHKLEKDGGVWWAKGGTNRLIEGMVTHFRRIGGEVRI
GDPVTRVETLGTRVTGVETRSGWSGKFDAVASNADVMHSYRDLLSDNSHAKRRAKSLGKKRFSPSLFVVHFGIEGTWPGI
PHHMILFGPRYKGLLDDIYTHGVLPQDFSIYLHHPTVTDPSVAPEGMSTFYALVPVANMGKLPVNWDEVGPILEKRILDE
VGRRLIPDIHTRIVTKFHYAPSDFSTDLSAHLGSAFSLEPLLTQSAWFRAHNRDDAISNFYLVGAGTHPGAGIPGVVGSA
KATARLMLEDLS

Sequences:

>Translated_492_residues
MKRACVIGAGFGGLALAIRLQSGGVQTTLIEARDKPGGRAYFWEKDGFTFDGGPTVITDPACLEELWALKGHRMADDVEL
MPVMPFYRLNWADGTNFDYSNDDASLRAEIAKLEPADVAGYDDFLRYSAGVFEEGYVKLGAVPFLDFASMIKAAPALARY
QAWRSVYSMVSSFVRNEKLREAFSFHTLLVGGNPMTTSAIYALIHKLEKDGGVWWAKGGTNRLIEGMVTHFRRIGGEVRI
GDPVTRVETLGTRVTGVETRSGWSGKFDAVASNADVMHSYRDLLSDNSHAKRRAKSLGKKRFSPSLFVVHFGIEGTWPGI
PHHMILFGPRYKGLLDDIYTHGVLPQDFSIYLHHPTVTDPSVAPEGMSTFYALVPVANMGKLPVNWDEVGPILEKRILDE
VGRRLIPDIHTRIVTKFHYAPSDFSTDLSAHLGSAFSLEPLLTQSAWFRAHNRDDAISNFYLVGAGTHPGAGIPGVVGSA
KATARLMLEDLS
>Mature_492_residues
MKRACVIGAGFGGLALAIRLQSGGVQTTLIEARDKPGGRAYFWEKDGFTFDGGPTVITDPACLEELWALKGHRMADDVEL
MPVMPFYRLNWADGTNFDYSNDDASLRAEIAKLEPADVAGYDDFLRYSAGVFEEGYVKLGAVPFLDFASMIKAAPALARY
QAWRSVYSMVSSFVRNEKLREAFSFHTLLVGGNPMTTSAIYALIHKLEKDGGVWWAKGGTNRLIEGMVTHFRRIGGEVRI
GDPVTRVETLGTRVTGVETRSGWSGKFDAVASNADVMHSYRDLLSDNSHAKRRAKSLGKKRFSPSLFVVHFGIEGTWPGI
PHHMILFGPRYKGLLDDIYTHGVLPQDFSIYLHHPTVTDPSVAPEGMSTFYALVPVANMGKLPVNWDEVGPILEKRILDE
VGRRLIPDIHTRIVTKFHYAPSDFSTDLSAHLGSAFSLEPLLTQSAWFRAHNRDDAISNFYLVGAGTHPGAGIPGVVGSA
KATARLMLEDLS

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54127; Mature: 54127

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRACVIGAGFGGLALAIRLQSGGVQTTLIEARDKPGGRAYFWEKDGFTFDGGPTVITDP
CCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEECCCCEEEECH
ACLEELWALKGHRMADDVELMPVMPFYRLNWADGTNFDYSNDDASLRAEIAKLEPADVAG
HHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
YDDFLRYSAGVFEEGYVKLGAVPFLDFASMIKAAPALARYQAWRSVYSMVSSFVRNEKLR
HHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAFSFHTLLVGGNPMTTSAIYALIHKLEKDGGVWWAKGGTNRLIEGMVTHFRRIGGEVRI
HHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEE
GDPVTRVETLGTRVTGVETRSGWSGKFDAVASNADVMHSYRDLLSDNSHAKRRAKSLGKK
CCCHHHHHHHCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RFSPSLFVVHFGIEGTWPGIPHHMILFGPRYKGLLDDIYTHGVLPQDFSIYLHHPTVTDP
HCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
SVAPEGMSTFYALVPVANMGKLPVNWDEVGPILEKRILDEVGRRLIPDIHTRIVTKFHYA
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECC
PSDFSTDLSAHLGSAFSLEPLLTQSAWFRAHNRDDAISNFYLVGAGTHPGAGIPGVVGSA
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH
KATARLMLEDLS
HHHHHHHHHCCC
>Mature Secondary Structure
MKRACVIGAGFGGLALAIRLQSGGVQTTLIEARDKPGGRAYFWEKDGFTFDGGPTVITDP
CCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEECCCCEEEECH
ACLEELWALKGHRMADDVELMPVMPFYRLNWADGTNFDYSNDDASLRAEIAKLEPADVAG
HHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
YDDFLRYSAGVFEEGYVKLGAVPFLDFASMIKAAPALARYQAWRSVYSMVSSFVRNEKLR
HHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAFSFHTLLVGGNPMTTSAIYALIHKLEKDGGVWWAKGGTNRLIEGMVTHFRRIGGEVRI
HHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEE
GDPVTRVETLGTRVTGVETRSGWSGKFDAVASNADVMHSYRDLLSDNSHAKRRAKSLGKK
CCCHHHHHHHCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RFSPSLFVVHFGIEGTWPGIPHHMILFGPRYKGLLDDIYTHGVLPQDFSIYLHHPTVTDP
HCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
SVAPEGMSTFYALVPVANMGKLPVNWDEVGPILEKRILDEVGRRLIPDIHTRIVTKFHYA
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECC
PSDFSTDLSAHLGSAFSLEPLLTQSAWFRAHNRDDAISNFYLVGAGTHPGAGIPGVVGSA
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH
KATARLMLEDLS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]