Click here to switch to the map view.

The map label for this gene is crtY [H]

Identifier: 87199834

GI number: 87199834

Start: 1916198

End: 1917394

Strand: Reverse

Name: crtY [H]

Synonym: Saro_1817

Alternate gene names: 87199834

Gene position: 1917394-1916198 (Counterclockwise)

Preceding gene: 87199837

Following gene: 87199833

Centisome position: 53.84

GC content: 68.09

Gene sequence:

>1197_bases
ATGACCGCGAGACGCTGCGACATTGCGATCCTTGGCGGAGGGCTTGCGGGCGGCCTCGTGGCTCTCGCCCTGCGCCGTGC
ACGTCCCGACCTCTCGCTGCTGCTGGTCGAGCAGGGCGAGCGGCTCGGCGGCAATCACGTGTGGTCGTTCTTCGGCAGCG
ACGTGGGCAACGAAGGCCGCGCCTTGCTCGACGGCATGTTTGTCGCCGCATGGCCCGAATATACCGTCCACTTCCCCGCT
TTCCGCCGACGGCTGAAGACGAGCTATTATTCGATCACATCGAGACGCTTTGACGCGGTGCTTCGGGCCGCGCTCGGGCA
GGACTCATTGATCACCGGGGTCCGCGCGCTCGCGTGCAGCGCCACCAAGGTGACGCTTTCGGAAGGCACCCGCATCGAGG
CGGGCGCCGTTATCGACGCGCGGGGCTTGCGCAACCTCCAGCACCTCACCGGCGGATGGCAGAAGTTCGTCGGCCGCCGG
CTCCGGCTCGCGCAGCCGCACAGTCTCGACGCGCCGATCGTCAAGGATGCTTCCGTCGAACAGATCGACGGCTACCGCTT
CGTCTATTGCCTGCCCTTTGCCGCCGACGAGATCTTCGTCGAGGACACCTATTACTCCGACAGCCCCGCGCTCGACGTGG
CGGTGCTGGGCGAGAGGATCGACGCCTATGTCGCGGCGCGCGGGTGGCAGGTGGCCGAGGTCCTTGGCGAGGAGCATGGC
GTGCTTCCGGTGGTAGCGGGCGGAAACTTCGACGCCTTCTGGCGGTCGAGCGGAGGCGCGGTCGCCCGCGCCGGTGTTCG
CGCCGGCCTGTTCCAGGCGGTCACCAGCTATTCGCTGCCCGATGCCGTGCGCTTTGCCCTGGCCCTCGCCCGGCAACCGG
ACCTCGGCGGCGAGGCTCTGGCCGCGTTCAGCGAAGCCTACGCGCGCCGGCACTGGAAGCGCTCGGCGTTCCACCGCGCA
CTTTCCGCCATGCTGTTCGCGGCGGCCCGGCCCGAGCATCGCTACCGCGTGCTCGAACGCTTCTACCGCCTGGACCGCCG
CCTTATCGAGCGTTTCTATGCCGGTCGGACGACCCTTCTCGACAAGGCGCGCATTCTTTCGGGCAAGCCGCCGGTACCGG
TAACCAAGGCCATCGGCGTGCTCACCGGCCTTGGCGCGCGCCCCAACCCACTTTCATTTGCAGGAACCCGCGCATGA

Upstream 100 bases:

>100_bases
TTCATGGCCCCTCCTGCCTGCCTGCCCTTTCTGACGTGTCGGGGACCGGGGCACAAGCGCGTGGTTGCACCGGCAACCGC
ATGTCCCTAAGCGGATCGGG

Downstream 100 bases:

>100_bases
AGCGTGCATGTGTCATCGGCGCCGGATTTGGCGGCCTCGCCCTCGCCATCCGCCTGCAATCGGGGGGCGTCCAGACGACC
CTGATCGAGGCTCGCGACAA

Product: lycopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTARRCDIAILGGGLAGGLVALALRRARPDLSLLLVEQGERLGGNHVWSFFGSDVGNEGRALLDGMFVAAWPEYTVHFPA
FRRRLKTSYYSITSRRFDAVLRAALGQDSLITGVRALACSATKVTLSEGTRIEAGAVIDARGLRNLQHLTGGWQKFVGRR
LRLAQPHSLDAPIVKDASVEQIDGYRFVYCLPFAADEIFVEDTYYSDSPALDVAVLGERIDAYVAARGWQVAEVLGEEHG
VLPVVAGGNFDAFWRSSGGAVARAGVRAGLFQAVTSYSLPDAVRFALALARQPDLGGEALAAFSEAYARRHWKRSAFHRA
LSAMLFAAARPEHRYRVLERFYRLDRRLIERFYAGRTTLLDKARILSGKPPVPVTKAIGVLTGLGARPNPLSFAGTRA

Sequences:

>Translated_398_residues
MTARRCDIAILGGGLAGGLVALALRRARPDLSLLLVEQGERLGGNHVWSFFGSDVGNEGRALLDGMFVAAWPEYTVHFPA
FRRRLKTSYYSITSRRFDAVLRAALGQDSLITGVRALACSATKVTLSEGTRIEAGAVIDARGLRNLQHLTGGWQKFVGRR
LRLAQPHSLDAPIVKDASVEQIDGYRFVYCLPFAADEIFVEDTYYSDSPALDVAVLGERIDAYVAARGWQVAEVLGEEHG
VLPVVAGGNFDAFWRSSGGAVARAGVRAGLFQAVTSYSLPDAVRFALALARQPDLGGEALAAFSEAYARRHWKRSAFHRA
LSAMLFAAARPEHRYRVLERFYRLDRRLIERFYAGRTTLLDKARILSGKPPVPVTKAIGVLTGLGARPNPLSFAGTRA
>Mature_397_residues
TARRCDIAILGGGLAGGLVALALRRARPDLSLLLVEQGERLGGNHVWSFFGSDVGNEGRALLDGMFVAAWPEYTVHFPAF
RRRLKTSYYSITSRRFDAVLRAALGQDSLITGVRALACSATKVTLSEGTRIEAGAVIDARGLRNLQHLTGGWQKFVGRRL
RLAQPHSLDAPIVKDASVEQIDGYRFVYCLPFAADEIFVEDTYYSDSPALDVAVLGERIDAYVAARGWQVAEVLGEEHGV
LPVVAGGNFDAFWRSSGGAVARAGVRAGLFQAVTSYSLPDAVRFALALARQPDLGGEALAAFSEAYARRHWKRSAFHRAL
SAMLFAAARPEHRYRVLERFYRLDRRLIERFYAGRTTLLDKARILSGKPPVPVTKAIGVLTGLGARPNPLSFAGTRA

Specific function: Catalyzes the cyclization reaction which converts lycopene to beta-carotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008461
- InterPro:   IPR010108
- InterPro:   IPR008671 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 43432; Mature: 43301

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRCDIAILGGGLAGGLVALALRRARPDLSLLLVEQGERLGGNHVWSFFGSDVGNEGR
CCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCH
ALLDGMFVAAWPEYTVHFPAFRRRLKTSYYSITSRRFDAVLRAALGQDSLITGVRALACS
HHHHCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
ATKVTLSEGTRIEAGAVIDARGLRNLQHLTGGWQKFVGRRLRLAQPHSLDAPIVKDASVE
CEEEEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QIDGYRFVYCLPFAADEIFVEDTYYSDSPALDVAVLGERIDAYVAARGWQVAEVLGEEHG
HCCCEEEEEEEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHCCCCC
VLPVVAGGNFDAFWRSSGGAVARAGVRAGLFQAVTSYSLPDAVRFALALARQPDLGGEAL
EEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH
AAFSEAYARRHWKRSAFHRALSAMLFAAARPEHRYRVLERFYRLDRRLIERFYAGRTTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DKARILSGKPPVPVTKAIGVLTGLGARPNPLSFAGTRA
HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARRCDIAILGGGLAGGLVALALRRARPDLSLLLVEQGERLGGNHVWSFFGSDVGNEGR
CCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCH
ALLDGMFVAAWPEYTVHFPAFRRRLKTSYYSITSRRFDAVLRAALGQDSLITGVRALACS
HHHHCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
ATKVTLSEGTRIEAGAVIDARGLRNLQHLTGGWQKFVGRRLRLAQPHSLDAPIVKDASVE
CEEEEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QIDGYRFVYCLPFAADEIFVEDTYYSDSPALDVAVLGERIDAYVAARGWQVAEVLGEEHG
HCCCEEEEEEEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHCCCCC
VLPVVAGGNFDAFWRSSGGAVARAGVRAGLFQAVTSYSLPDAVRFALALARQPDLGGEAL
EEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH
AAFSEAYARRHWKRSAFHRALSAMLFAAARPEHRYRVLERFYRLDRRLIERFYAGRTTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DKARILSGKPPVPVTKAIGVLTGLGARPNPLSFAGTRA
HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8422926; 7808389 [H]