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The map label for this gene is yedY [H]

Identifier: 87199829

GI number: 87199829

Start: 1911497

End: 1912246

Strand: Reverse

Name: yedY [H]

Synonym: Saro_1812

Alternate gene names: 87199829

Gene position: 1912246-1911497 (Counterclockwise)

Preceding gene: 87199830

Following gene: 87199825

Centisome position: 53.69

GC content: 63.2

Gene sequence:

>750_bases
ATGACCCTTGTCAGCAGACGCAGCGCACTGATCGGAACGCTTGGCCTGGCGGTGGCCGGATGCGATCGCATCACGACCTC
CCCGACTGTACGCAAAGTGCTGACGCTCGGCGAAAAGGCGACGCTTTCCGGGCAACGGCTCGTGACCGACCGGAACGCGC
TTGCCCCCGAATTCACGACCGCGGACCTGTCACCGCGCTTCCGCGTCAACGGGAACCGGATGCCTGCGTCGGCCGACTAC
CAGGCACACATGGCGAGCGGCTTTTCGACATGGCAACTGGAGGTTGGCGGGCTTGTGCGGCAACCCTTGCGGCTGTCGCT
GGCGCAACTCATGTCTGCGCCGCAGCGCACGCAGATCACCCGCCACGATTGCGTCGAAGGGTGGAGCGCGATCGGCGAAT
GGACCGGGGTGCCACTCGCCCTGCTTCTGCGGAAAGCCGGAATTTCATCGAATGCGCAGTACGTTGTATTCCATTGCGCA
GATGATTTCTCCGGAATGCGTTACTACGAGAGCATCGACATGATCGATGCGATGCACCCGCAGACGATCCTGGCCCATAC
CATGAACCGCCAGCCTCTTTCGGTGGCCCACGGTGCGCCGATCCGCCTGCGGGTGGAGCGGCAGCTTGGCTACAAGCAGG
CGAAATACGTGATGAAGATCGAGGCCGTGGATCGGCTCGGCGGCATCCACGGCGGCAAGGGTGGGTACTGGGAGGACCAT
TCCGGCTATCAGTGGTACGCGGGCATCTGA

Upstream 100 bases:

>100_bases
TGGTCCACCTCGTCATGGTGGTCCTGGCAGGCCCTTTCAACGAACTGAGGTCCATGACCACGGGGTGGTACCGCCTGCCC
CCAGCGAGGAAGGGTGAAGA

Downstream 100 bases:

>100_bases
ACCTGTGCCGCGTGAGACGGCACGTTCCGGCGTCCTAGAACTTCAGCATGATGCGCCGTGCCAGGGCGGGGGAAACCGAG
TTCACGACCTGTAGAACCTT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTLVSRRSALIGTLGLAVAGCDRITTSPTVRKVLTLGEKATLSGQRLVTDRNALAPEFTTADLSPRFRVNGNRMPASADY
QAHMASGFSTWQLEVGGLVRQPLRLSLAQLMSAPQRTQITRHDCVEGWSAIGEWTGVPLALLLRKAGISSNAQYVVFHCA
DDFSGMRYYESIDMIDAMHPQTILAHTMNRQPLSVAHGAPIRLRVERQLGYKQAKYVMKIEAVDRLGGIHGGKGGYWEDH
SGYQWYAGI

Sequences:

>Translated_249_residues
MTLVSRRSALIGTLGLAVAGCDRITTSPTVRKVLTLGEKATLSGQRLVTDRNALAPEFTTADLSPRFRVNGNRMPASADY
QAHMASGFSTWQLEVGGLVRQPLRLSLAQLMSAPQRTQITRHDCVEGWSAIGEWTGVPLALLLRKAGISSNAQYVVFHCA
DDFSGMRYYESIDMIDAMHPQTILAHTMNRQPLSVAHGAPIRLRVERQLGYKQAKYVMKIEAVDRLGGIHGGKGGYWEDH
SGYQWYAGI
>Mature_248_residues
TLVSRRSALIGTLGLAVAGCDRITTSPTVRKVLTLGEKATLSGQRLVTDRNALAPEFTTADLSPRFRVNGNRMPASADYQ
AHMASGFSTWQLEVGGLVRQPLRLSLAQLMSAPQRTQITRHDCVEGWSAIGEWTGVPLALLLRKAGISSNAQYVVFHCAD
DFSGMRYYESIDMIDAMHPQTILAHTMNRQPLSVAHGAPIRLRVERQLGYKQAKYVMKIEAVDRLGGIHGGKGGYWEDHS
GYQWYAGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=146, Percent_Identity=34.2465753424658, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859905, Length=169, Percent_Identity=30.1775147928994, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 27415; Mature: 27284

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVSRRSALIGTLGLAVAGCDRITTSPTVRKVLTLGEKATLSGQRLVTDRNALAPEFTT
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
ADLSPRFRVNGNRMPASADYQAHMASGFSTWQLEVGGLVRQPLRLSLAQLMSAPQRTQIT
CCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHH
RHDCVEGWSAIGEWTGVPLALLLRKAGISSNAQYVVFHCADDFSGMRYYESIDMIDAMHP
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
QTILAHTMNRQPLSVAHGAPIRLRVERQLGYKQAKYVMKIEAVDRLGGIHGGKGGYWEDH
HHHHHHHCCCCCCEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGYQWYAGI
CCEEEECCC
>Mature Secondary Structure 
TLVSRRSALIGTLGLAVAGCDRITTSPTVRKVLTLGEKATLSGQRLVTDRNALAPEFTT
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
ADLSPRFRVNGNRMPASADYQAHMASGFSTWQLEVGGLVRQPLRLSLAQLMSAPQRTQIT
CCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHH
RHDCVEGWSAIGEWTGVPLALLLRKAGISSNAQYVVFHCADDFSGMRYYESIDMIDAMHP
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
QTILAHTMNRQPLSVAHGAPIRLRVERQLGYKQAKYVMKIEAVDRLGGIHGGKGGYWEDH
HHHHHHHCCCCCCEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGYQWYAGI
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]