Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199806
Identifier: 87199806
GI number: 87199806
Start: 1887082
End: 1887516
Strand: Reverse
Name: 87199806
Synonym: Saro_1789
Alternate gene names: NA
Gene position: 1887516-1887082 (Counterclockwise)
Preceding gene: 87199812
Following gene: 87199805
Centisome position: 53.0
GC content: 65.29
Gene sequence:
>435_bases ATGCAGGCACAGATCCTCATGCCGGCGGCGGTGCTGGTGCTGTGGTCGATCGTGATGCTGTTCTGGATGGCCTTCACCCG CCTGCCCGCACTGACGAAGCTCGGCGGATTGGGCAAGGCCAAGCCGGGCGGCCGGGGGCAGGATCTCGAAGGCGTGCTGC CCGACGAAATCAACTGGAAGGCGCACAACTATGCCCACCTGATGGAACAGCCGACGCTGTTCTATGCGACCGTCGCCATC CTGGCGATCCAGGGCGCGGCAGGCCCGCTCGATGTCGGGCTGGCCTGGGCGTACGTCGTGCTGCGCGTGATCCATTCGGT CTGGCAGGCAACGGTCAACCGGGTGCCGGTGCGTTTCAGCCTGTTCCTGCTGTCCACCACATGCCTGATCGTGCTGGCCA TCCGCGCACTGGGAGCGACGATGGGCCACATGTAA
Upstream 100 bases:
>100_bases CCGTTTCGCCTGCAATCGGTCGGGCAATATAAGTTGCATTTGACAATCCAACCCGTGCCCCGCACTCTCGCCGCAGATTG GACCGGGGGAGACGGGACGA
Downstream 100 bases:
>100_bases CGCCATTGACGATGACAAGAGGGGGAGAATGACGATGAAAGTGGCAGCAATCCTGCAACCGGCCGTCGCGTTGATGGCTT GGACCATGGTCATGTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MQAQILMPAAVLVLWSIVMLFWMAFTRLPALTKLGGLGKAKPGGRGQDLEGVLPDEINWKAHNYAHLMEQPTLFYATVAI LAIQGAAGPLDVGLAWAYVVLRVIHSVWQATVNRVPVRFSLFLLSTTCLIVLAIRALGATMGHM
Sequences:
>Translated_144_residues MQAQILMPAAVLVLWSIVMLFWMAFTRLPALTKLGGLGKAKPGGRGQDLEGVLPDEINWKAHNYAHLMEQPTLFYATVAI LAIQGAAGPLDVGLAWAYVVLRVIHSVWQATVNRVPVRFSLFLLSTTCLIVLAIRALGATMGHM >Mature_144_residues MQAQILMPAAVLVLWSIVMLFWMAFTRLPALTKLGGLGKAKPGGRGQDLEGVLPDEINWKAHNYAHLMEQPTLFYATVAI LAIQGAAGPLDVGLAWAYVVLRVIHSVWQATVNRVPVRFSLFLLSTTCLIVLAIRALGATMGHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15693; Mature: 15693
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQILMPAAVLVLWSIVMLFWMAFTRLPALTKLGGLGKAKPGGRGQDLEGVLPDEINWK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC AHNYAHLMEQPTLFYATVAILAIQGAAGPLDVGLAWAYVVLRVIHSVWQATVNRVPVRFS HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LFLLSTTCLIVLAIRALGATMGHM HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQAQILMPAAVLVLWSIVMLFWMAFTRLPALTKLGGLGKAKPGGRGQDLEGVLPDEINWK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC AHNYAHLMEQPTLFYATVAILAIQGAAGPLDVGLAWAYVVLRVIHSVWQATVNRVPVRFS HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LFLLSTTCLIVLAIRALGATMGHM HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA